Ll_transcript_246379

• Id Trinity: FTRINITY_DN53393_c2_g1_i3
• Name Transcript: Ll_transcript_246379
• Sequence: CATATATATATATATATAATTATATATATTACTAGAGATAGAGAATTTAAAAAGTTTCACTTATTTCAGTATTAATTTTCTTCTAGGTAATTATGTGTTT CAGTATAATTAATATGGTCAATTCAATGGTTTAGAGCATAGATGTTTTTATATTTAAAAATTAATTCATAAAAGAAAGAAAAAAGTATTTGAGACTTAGA CAAATAGGCCTCCTTAAACAAATAGGTTGAAATGGGTCTGATCCAATCCATTCTTTTATACAACTTGTTCAAACCCTAATTTTAGCTAAGTCGTTTCCGT CATTTTCCATTTTGCAACAAACATAGAGAAGAGAAATGGAAATGGAAAGTGAAGAAAGAGAGAGAACATAGAGAAGAGAGAAAGAACTAGATCGATACAA GAGAAATGAGAAAACAAAGGTGAAAGGAGCGACACATGTGTTTATTGTTTTATTCAACATAGGTCGCAGACCAAAATGAGCCGAAGATGGAATTGGCAGG CTTGTCGATTCCATCGATCCTTCGCTCCAACATGACGATTTCACCCGATTTCAAGGTCTAGCACGAGTTGAGATCGAACATGGGTAAGCTCTTGTAGTTT GTAAAATCGTGCGATCCCATGAGCGGGATCTCGATTTTAACTACCATGTGCATGGATGATATATTTTTCCCTTTTCCTTTTTTAATTGAACATATGAATG GATGAATGTTTGGATGATGTGTTTTCTGTTTAGATGCATGTATGCGTGAATGAATACATCAATGAAGTTTAAATGATTTATTTTTTGAATGAGTGGATGA ATGAATAAGTGAAGGAATGTATGAGTAAGTAGATGAGTAGGTGAATGATAATTCAAAATGCATGCCCCTTAGTGTAATGTACCATATTCTGGGGTGGTTT AGCCATCATAAAATATATGGAGTGTCATGATAAATTAACACCTATCGTATAGTTCAGGCTAGTTGGGGTAAAGATGGGTTGCCCCATTTTCTTTTTATGA GGAAGGTGACTATTAGGACGGTGGGTCCTGTTAAGGGTGTCTATATGCAAATGAGACGTGCCCATGATATAGAGATACCAATGTCCAATGATATACTGTA CTATTTGGGTTTGGGGTGACTAGTGAGTCATCTTATTTAAGGGACATAAGTCCTGATTTAATTTTAAAATAAAAAATGTTGAGGAATGGAAATGAAAGTG TGCTTGTGTTCTCATCATTCCCGTGAGGCAGAGTGTAGTGATGTTTCATTAATTAAATATTTTATAGCGTCATTGTGATTATACAATTTTACTCTGTTGA TACTTGTTTCTGCTTTGTGGACGTTGTTTGCTAATTCAAGCCGTAAATTTCTGATTTACAGCTTCTACTTCACTATGGTGTCAAGGATAAAAAGGGGATT CTTTCAGATAAGCATGTTATGCTTTCTGCAAAATGTCGGTCCCTATCAAAACTTCTTCCTTCACTGAAGAAGGGTGGCCATCGTGTTTTGATCTTTAGTC AGTGGACATCAATGCTTGACATATTGGAGTGGACTTTGGATGTCATTGGGTTTACCTACAAACGGCTTGATGGAAGTACACAGGTAGCAGAGAGGCAAAC AATAGTGGATACATTCAATAATGATACTTCCATATTTGCATGCTTGCTTTCCACAAGAGCTGGAGGTCAAGGCTTGAACTTAACCGGAGCTGATACTGTC GTAATTCATGACATGGATTTTAATCCACAGATTGATAGACAAGCAGAAGACCGTTGTCATCGAATTGGTCAAACAAAGCCTGTAACCATATATCGGCTGG TGACCAAGGGAACAGTTGATGAAAACGTATACGAGATTGCAAAGAGAAAGCTGGTATTGGATGCTGCTGTCCTTGAGTCCATGGATGTGGTTAATGAAGG TGACATGCCTGAGAAGACCATGGGAGAGATATTGTCTGCAATTTTGTTGAGTTAAAAATTGAGCCTAAGAAAACAATTTACTGAAGAGTTAAATGGGGTA TACCGAAAGTGTAAAGTTTTATACAATGAGCCTATCATTCATCATTAATGTGTATGACTTTTATTTAACATTCAGTGATTGTCCGCATGTCAATGGTGGA TGATGTGCTGATAGTGCAAAAATCTTTACACCATCAATGCATAACCTATTTTCTCTTTGCTCCACCCCTTTTTTCTTCTTTGTAGGTTTGCACGAATTAT ATTTCTGATTCTGATCTTGTATTAGCCATATGATGATTTCAGAGTAAAGGGAATTGGCCGCAGGTGTACATTTAGCCTTAATTAATCCATGTATTGATGA CAGTGAATAATCATTGTCGGTATCAATAGGAGAGTTAGTATAAATAAGTCACTGTAGAAGTTAGCAATTTTTTTGAACTCTTGTTGGAGCCCCAATGATG AAAGCTCCCCCTTGCATTTTAAATTTTCCACATTCCTATCTTTTCCTGTTATACTTTCTGCTATTTTCATTGTTCCATTTGCTGGAAAGAATGTTCTAGT TCTGTGGTGGCTTGATAGAATATGTG
• Tissue: flowers
• Gene name: LI_gene_33351;
• Additional information: details;

Expression of Ll_transcript_246379

FPKM

• FPAB: 0.3
• FPNAB: 0.2
• LF1: 0.2
• LF2: 0.3
• LF3: 0.3
• LF4: 0.1
• UF1: 0.2
• UF2: 0.1
• UF3: 0.1
• UF4: 0.1

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_246379

• Blastp: Protein CHROMATIN REMODELING 19 from Arabidopsis with 85.96% of identity
• Blastx: Protein CHROMATIN REMODELING 19 from Arabidopsis with 86.39% of identity
• Eggnog: helicase activity(ENOG410XNUT)
• Kegg: Link to kegg annotations (AT2G02090)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019461602.1)
• Pfam: Helicase conserved C-terminal domain (PF00271.30)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;