Id Trinity | FTRINITY_DN53408_c8_g4_i5 |
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Name Transcript | Ll_transcript_128078 |
Sequence | ATTGCACTTTTTTCTCTCTCTTGCCCTTTACTTACCACGTCCATCTTTCCTCTATCGGAGGCTCTATGCGCATAGCGCACCCATACATCACAATATGCTT CCCAACTCACGCTTACACCTTCTTCCCTTACCCGGTGCACGTTAGTACCCATCACTATCCCAATTAAGTAATTGCAACTTACCCAGCTAAAAGCTGAGGT TACAAATACTTAACCTCGCCGATTCCCGTGACTGAAAAAAATGATCAAATCCTTTCTTGGAAGGCACTGCTAACGTGCGCTATCATCTAAACGCAGTCGT TTAATGATCTCTTCGTATCGTTCATCGTTTTTTGCTATGGAGAGCAACGTGAATTGAACAAAGGGTTTAATCGGTTTTGAATTCGGTGAAGCAACAATCG TTTTCCTAATTGAGATTGTGGAAACACATATTCTATAGAAGTTCTATAGTGTTACGGTTTTTTTAGGTTTTGGTTTATTATTTTTTCTCTTAGAGTGAGT AAAATGGATCCTGAGGAGGTTAATTTGAATAGAGAAAATGGAAAAAGTAGTGATGGATTCGTTGATAGAAGTAAAGTAAGGATTTTATTGTGTGACAACG ATTCCAAAAGTTCACAAGAGGTTTTTACTCTTCTTCTCGGATGTTCTTATCAGGTTACTGCCGTAAGGTCAGCTAGGCAGGTAATTGATGCACTGAATGC AGAGGGGCAACATATAGATATCATACTTGCTGAACTTGACCTTCCAATGAAGAAAGGTATGAAGATGTTAAAGTACATTACACGGGACAAAGAATTGCGC AGAATTCCTGTCATAATGATGTCCGCACAAGATGAGGTATCCACTGTTGTTAAATGCTTGAGACTTGGAGCAGCAGACTATCTAGTAAAGCCTTTGCGCA CTAATGAACTATTAAATTTGTGGACACACATGTGGAGAAGGAGGCGCATGCTTGGACTTGTAGAGAAGAACATCTTGAATTATGATTTTGATCTGGTTGC GTCAGACCCTAGTGATGCCAATACGAACAGTACCACCTTGTTCTCTGATGACACAGATGACAAGTCCAAAAGAAGCACCAATCCAGAGACAGGAATGTCA ACCCAACAAGAGCTAGAGGTGAAGCTAAAAAACATTATTTAACTAATGAAAGAATGTTAGTAAGCAATGGGTTCAACAAGCTCTCAAATCAACGAGCTTG TGGACCATGGTAAACTTTGAAATTAATTTAATCTATAAAGAGATGATGTCTTTTTAAATCAATTTTCAGCTGATTTTGTAAATCATCCTACCTTTTAGAA TATAAACTTGGTCAATGACACGCTTCCAAGTTTTATAATTGCCTTCCATGTAAAGGTCATATCAGGCGTGATGCTACAATAGAGATTCAATTATAGAACC AATAAATCATTTTTAGTAGAATTTGTTGATTACTGAGTATCTTAGAAGTTTTTACAGTATCCTTGATGATCCTCTTAGGATTTATTTCCTATTTATATTC CCTATTTTTTATTCAATTAGGACTAAGATTCTGCTATTCATAATAGGACTATTGGAGTTTGCCTTTTGTTTCCCAACACGTCACTCACATTATTTCCTTG GTTCACAGTTGTCTCTCTTTTTCGTATTAATCACACTTTTTTGAGTCTTCATTCTCTCCTTTTCTCCTTTCTTACCAAAAACCCTCCAATTCAACATGCT ATCAGAGTGATACTATCCTCCATCACCTATACTGTCATCGTTCCACTGTCGAGTTCACAAAAGTTTGGAACTTTGATTAGCCATCTCTTGTAGCGTTGTG TCTCCGACATACTCTGTCTCCTCAGGCACAAGCACCATCCGATCACTTTCTTGCGAGATATTCAGCCAGCAATTGCACCATCAAACTTGTCTTTTACCAA TTTGTCACTTTCAACACCTTGTCGGTTGGCCACATGTCGTCCTTCCTGTCATGCCTACTCGGCACATTTGACGAAATTTCTGCCCTCCATTTGTTGCGCA GAAGTCATCTTTTTCTACTCTACCCAGTCTGTCCTCACCTTGTCCAGTTGCACCAGGTTGTTGTGTTCCCTTGCTCAAAGGGTTTCAAGTGTATTGGGGT TTTTGTTTTTTGCCATTATACTCCCACAGCTGTTTCACCCCCTTGACAGGCACCTTGGCTTTGATTGGAACTATTGGGCTGTTTTTGCCATGTTTAATGC TCAAACCTGCTTTGGCTTCTTAGTTTGGCTCTTCACCAATGCTAGTTCAGCATGGAGGGGGAGAATATTTGTCTGAAATTATTCTTCAATTTTGATATTT ATCTCAACTTATTCTTCAATTTTGATATTTGTCACATCATTCTTTTACCTCTGGTGGATCATAACAATGCCATCTCTTCCCACTAATGATTTTTTTTACC TCCAGCAGTGCTTAAAGGGATGCAATGGGTGTAGATGTGTCATCAGTCATACTTTTTTTCACCAGTTACTGGTGTTTAAGATATGAACACAAATATTGTT ATATCACTACTAATAAGTTTAGATCTGAGATGCTATAATCACATTTTATGTGATCTTTTATGTATTTAATTTAACTTTTCAGTCTAATATTGCCATTGCT GCTGCTGTTGTTGAGGAGCCACCAGATGCTCATGCATCAGAGTGTCGGCCTGATGTGCCTAGAATTAGTGATCTCCGAACAGGTGTGTTCCTCCTCTCCA TTCAACTTTTTCTTAAGATCTGGAATTATATAATTTTTTCGCACACGTGGAAGTTATACAGTGTAACATGTCGGCCTAGGTACATCAAATGATTGTAAGA CATGTTTTGTATACCATAAAAATGAAACATCCTATGATAGAACTTGGCAAAATCATGTGCTCACGGCTTATGGTCTTTATGTTCATGTAATAGTTTGCAC CCTCATATTTTGCCTTCTATAGATCCATAGTTTTTAATTCTGGAATGGCTTCAATGGTAAATGGACTTTTGAGTTCCTTGGGTTGAACAAATTTTTTTAT GTGAATAATACATACCCCTTTTCAGTGTTATCATTTTTCTCTCTGATTTTGCCATAATTTTGTAGGACATTTTTCATCTGGTCCAAAGAAGAGTGAACTA AAGATTGGGCAGTCATCAGCCTTCTTCACTTATGTTAAAGCATCCGTGTCAAAGAGCAACTTTGAAGGAATTGTTCATGTTGGCAACAATGCTGCTATAC GGATGAGGGTCGAAGATGCACACCAACCATGTGCTCAACAGCGGGTTAATGACCTTCAAACACTTGCAAATGGAGAGACCTGTGAAAGTCAATCACAAGA TGACTTTCCCAGCAGCAATAGTTTTCCTGATTCTTTCTCTATAGAGAGGTCTTGTACTCCACCTGCGTCTATGGAAGTTTCGCCACAAAATGACCCCAAG GAACAAAATCTGCCTCCAGGTATGGTGCATCCAAGAAATGGAACTCATGGTTCTGAGATTGATGTTTCTACCATGGCTACCCAACATGCTTATCCATATT ATATATCTGGAGGTTTTAATCATGTTATGATGCCTTCATCAGCACAAATGTATCAAAAGAATATTCAGGACATGCAGAATCATGCTTGTTCAGCTATGAT TGCTCAATATAATCGTCTTCCTCAAGGTCCTCCTCATGCAATGGGGATGACGTCCTACCCATATTACCCGATGAATCCATACTTACAACCTGGTCAGATT CCTACATCTCATCCATGGCCATCTTTTGGAGGTTCAAGCTCATCTGAAGTAAAATTAAGTATAGGTGATAGGAGAGAAGCAGCATTGCTGAAGTTTAGAC AGAAAAGGAAAGAGCGTTGCTTTGATAAGAAAATCAGATATGTTAATCGGAAACGACTTGCTGAGCGTCGGCCTCGTGTGAAGGGACAGTTTGTCAGAAA GTTAAATGGCACTAATGTGGATCTTAATGGACAGCCTGCTTCCATCGACTATGACGAAAATGTTGACGAGGAAGATGACCAGGGAGCAAGAGATTCCTCT CCCGAGGACACTTGAGCATGTCAAAGGACACAATTTAGGTATTGTTTCTTTGGGTGCTTGTGGCGCTTATCTCCAACATAACTATAATGAGTGGTTTATA TTTTCACATATGAGCTATACTACCCATGCTATATTCTTAATTGAAAATAACACCACAAGCACCTAGAAAACGTTATGATGACAATGGAGCCGTATGTCCC AAATTTTGTACTACTCCATGTACTCAATGTTTTTCATTGGTTGAAAAATAAATCATGAATTAAATATATATTAACTTTATATTTTCTGACCAATAAAAAT GAAGGGGTATATGAAGTGATATAAATTTTGGGACATAAGATGTGTTCCCGATAACAAAAGGATGAAGTGGCACTAGATTCCTTCCTCCACTAATATCTGC CTATCAAGGATATGCTTCTGTCCCTTGCTTTAATTGAAACTTGTTGCCTTAGCATTAGTTGATGAGAGCATGCATCCTCATTATTTGGACTTAAAACAAT TTCTTGCCCAGTCACTTTATGACTTAGTCAAATGATCCTTGTTAATGAGCTCCTTTAGAAGAAATCGTTCTGATTATGCCCAAAGCGGTTGAAAGTATCA CTGTTTTATTGAAACTTTTAGAAGCTGTGCATGCATATGTTTATGGAGAAAAGGCAAGATACCTTGAATTTGTCCTGAGAAATGGGTTATTATTATTCTG AGATTTTAACATCAAACAAAATTTCACTACCATTCAAACTTTTCCCCâBLAST |
Tissue | flowers |
Gene name | LI_gene_33529; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_128078
Blastp | Two-component response regulator-like APRR1 from Arabidopsis with 48.95% of identity |
---|---|
Blastx | Two-component response regulator-like APRR1 from Arabidopsis with 81.25% of identity |
Eggnog | Transcription factor(COG5641) |
Kegg | Link to kegg annotations (AT5G61380) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019417277.1) |
Pfam | CCT motif (PF06203.13) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |