Id Trinity | FTRINITY_DN53409_c1_g1_i11 |
---|---|
Name Transcript | Ll_transcript_129890 |
Sequence | CTTTATTTCTGAATTTTCTGACTTTGGTTATCAAGATAGAAGGAATCTTAAGAAAACTATGAAGTCTAATTTCTTATAAAGTTTTGTTTATTAAAGCTCA AAGTGATTCCTTAGGTTCCATTTCTTTGATGTAAATTTAAAGATACTTAATTTATCAATAGCTTTTCACTAGTTTAATCTCAAGTTCTAGCTTTTCCTCT TGCTTCCTAAACAATTGTGTTACATTATAAAATAGCCAGCTTGGGTCTCAGCCATTATCATTCCTTTGCAATTTCCATTTTCCTTACATAATGAAAAGGG TTAGAGAAAGTATTCACTAGTGATTTGTTGCAGGTTCAAAAGAAATGGTCTTGTAATAGAAGCCATCGAATCAAATTGCAATTGTGTTTCGTATTTCCAC TCTTGATGTGAAGCCAGGAGAAGAAAATATTCCTGTTGAATGGCTAAAGCAGTTCTGGTTACAACTCTTAAATTTTATTGGTTCAAGATATCAACAAATC TTCTTTTGTACCAAATAGATTTCATAGAGAGTGTTTGGCTTCATTCTAGGAGCAAATATTCTTCAATTTAACTTCAAACTTGAAGAGGAAAGTTTCTTTC CTATTTGGCTGTTTGAAGAGTCATTTTTATTGAGCAAACCTCCTTTGACAAAAGTTACTTCGTTTCCTTTGGTTAGGTTCTCTCAGTAAAGACATATATG AATTTTTGCTGGCTTCAGTAAAAATATTACTACTCTGGAGTAATTCCTCTAAATCTCCTTTGGCATCATTTAGTTATCTTGTTCTGCTTCCTTCAATAGC TAGAAATTTTCCTTCCAACAAGCCACTAAAAAACAAAAACTGAGTCCTAGTTCACCAATATTCTGTTGTTTGAAACCTCTCTCAACGGTTTCTTTATGAA AATTTTCCAGTCCAAATTGGGCAAATCTCCTTTGGCATTTGGAGTCCTTAATTGACTCCTATTATCCTATAGCCTATAGGGCAAATCTCCTTTGGCATAA AATCTCATGTTTCAGTGGTCAAGATAATCTTTTGGAGGTACTGACTATCTGTGACAAAAAAGTTCTATCAAGCAGAAATCCTTTACATTATACACAATTA TCCATTGAAGGTCAATACCGGCATTCCAGTCGTGACCGAAATATATACTTACACTGGGATAGGGTGCTTCATTTTGCTTGAGAAGGCATATTGTCGATGG ATGCACTCAGTAGTGATTCAGACTGGGAGACATTCAGTGACAGTAGCTGCAGTGAGGACCAAGAAGAAAATGATTTTCTATATGGTGGTCATGCTCAGAA CATATTATCAAGTTTAGAGCAAAGCATTGGGAAGATAGACGATTTTCTCTCATTTCAGAGAACATTTGTTCAAGGAGATTTAGTCTGCTCCTTGCCAGAC CAATCTGGACAGATGGGCATGGTCGTAAGTGTCAATGTGTTTATGGATTTAGAAAATGATCACGGGAAAGTATTGAAAGACGTGAGCTCGAAGAAACTGT CAAAGATTCGCTCCATTTCAGAAGGTGATTATGTGATGAAGGGGACGTGGCTAGGTCAGGTTAAAAGGGTGGTGGACAAAGTGACTGTTTTGTTTGATGA TGGAGCTAAATGTGCTATCACTGCATCAGAGAGAGAGAACCTTATACCACTGACTCATAATTTTCCTGAAGATTCAGATTATTCATACTATCCTGGGCAG AGAGTAAAGGTTAAGTCGTCAAGTGCTTATAAAAGAGATAGATGGTTATGTGGCACTTGGAGAGACAATCAAGATGAAGGAACTGTTTGTTCTGTGGAAG CAGGTTTCGTGTACATTAACTGGATTGCTTCAGTTCCCGTGTGTTGCGATTTGAGTGTGAATGCTCCCCCGTGCTGGCAAGATTCCATGAACTTGACTGT GTTGTCATGTTTTTCACATGCAAACTGGCAACTTGGTGACTGGTGCATGCTCTCAGCTGCAGACCAAAAGGAACAGGTTATTCAAGATGCACCTATAAGT GATCTTAGAATGGAGCATAGTATGGAAAGAGGAAATAAGATAAGAAACCTTAGCTCTTACATTGGGGAACTATTTATAATTGGGAAGATAAAGACCAAAG TTGACATTGTGTGGCAAAATGGTGAATATACTTTGGGGTTAGGTCCTGAGAGTTTAATACCAGTGAATATAATAAACAATCATGAATTTTGGCCTCATCA GTTTGTGCTGGAAAAAGGTGCTTCTTATGATCCTCTTAACCCTAGAAGTCAAAGATGGGGTGTTGTCCAATGTGTGGATGCAAAGGAGCATATTGTGAAG GTACAATGGAAAACTGCTTCCATATCCGACCCAGATTATTTGGATGGAGGAAAAATGGAGGAGACTGTGAGTGCGTACGAGCTTATAGAGCACCCAGACT ACTCCTTTTGTTTTGGTGATATTGTGTTCAAGGCGGCTCAAAAACAGCTTGGTTATCATGCTGAGAAAGATAATGCAAAGTCAGTGATTGACTTGAATGC GGAGGCTGCTCTTAAAGACAGGAACCGAAAGGGCTATCAGGATGAGTTACCTGATAACCGTATCCTATGCTGTATTGGCAATGTTATTGGTTTCAAAGAT GGTGAAGTGCAGGTGAAATGGGCTACTGGTTTCACAACCAAGGTTGCGCCTTGTGAAATTTTTCGGATCGATGAACATGAAGGTTCAAATGTTGAGCAGT TAATTCAAGGGATGATTGAACATGGAAATTTACCTTCTCAACAGAAGGGAAAGGACATGTCAAATTGTGATGGCATTAGAGAGAATTATGAAAAGTATCC ACTTGAGTGTAGTTCCTTTTCCTTTCCCCAAGCTGCCTTAGAACTTTTCTCAAGCATCAAAACAAGTATACTCCAAACACTTGGTGGAACATCACTTTCA GCAGTTTCCTCAGTACCTACATTTGAAGAGGATAATGGATCTGATTTTATTGATAAGCAGAATTTGGAAACTCGTGACCATTGCACTGAATCACATCCAA ATACTCAGTTGCAATCTGCTGAAGATTGCACTTCATATCCACAAGTTATTAGGATTCATGAGAAGATTGATTTTCCATTTTCTTCAGACAGCAACAGTTC AAACCAGTTTAAGCAGTTTGACGTGATAGAAAATTGCTCTGACCACTACTTTTTGGATGAGGGAGAAGGGTTGAAATTATCTCAGATTAAAAGAAGTTGG ATGAAAAAGGTTCAACAAGAATGGAGCATCCTCCAGAAAAATCTTCCTGAAACTATTTATGTTCGTGTTTTTGAAGAAAGAATGGATCTCATGCGAACGG CAATTGTTGGTGCACGTGGAACCCCTTATCATGATGGGTTGTTTTTCTTTGATATACATTTCCCTCCAGAATATCCAAATGAACCCCCTGTAAGCTTCTA AATGTACTTTGCAGTGTTTTGTTACTTACTTTCATGCATGGTTCATGCATGGCACCCTTGTTTATAAGGTCCTCCTCTTACTTTGAAATGTGAAGTTCAA TATTTATTGATATCTGAACAAACTCTCATGTAGTACAAATTTCATGCAGATGGTGCACTACAATTCTGGTGGGCTTAGATTAAATCCTAATTTGTATGAG TCAGGGAAAATCTGTCTCAGTCTCCTGAACACTTGGACTGGTACAGGCACTGAAGTGTGGAACCCTGGAGCCTCCACAATTCTTCAACTCCTTCTCTCTC TGCAAGCCCTTGTCCTTAATGACAAGCCTTATTTCAATGAGGCTGGATATGACCAACAAATCGGCCGAGCCGAGGGAGAGAAAAACTCAGTCAGTTACAA TGAGAATGTTTTCCTTGTCACAAGCAAATCCATGTTGTATCTATTAAGAAAACCACCCAAGGTAGAATTACTACATCTATAATTTGATTTCTTCCATAGT TGCAGTTTATTCAGTGATAATGGCCTTGAAATAATAGAGAATAATTCTGAGTGGCATTACCAGTTATTTATGTGTTGACCATGGATTTAAGCACAATATG CCAGATGTGTCTCAGAACACAATAAAGACATTGGACACTGCTAGTACCAGGATATTTTTGCATGGTTAAATGAAATATATAATATCTCAAACAAAGAGGA GGTTGTTTGTTTGAGATAAAAAAATTCAAATGTCCTATAATATATACATAAATATACAATAACAATCAAACCTTAATTCCATGTAACCAACCTCATCTAG TGGAATTAAGGATTGGTTATTGTTGGGTATTTTTGTATAAATATTATAGGGCGAGTCTCGATGCAACGATAAGGTGATTTGCTTTGTGACTTGGAGGTCA TGGGTTCTAATCTTAGAAATAGTCTCTTCGCTTGTGAAAGTAAGATTGCATACATCTACTCTCCCTTGACCTTACTACGTGGGAGCCTTGTACGTTGGAC TACTTTTTTTATATTCATGTATATTGAGTTTGAGCTTCTGGCATGTCCTTGAGTTTCTGCAGGTTTTCAATTTATTCTAGTAGATTAGATTAAAGCTTTC AGGGTTTGGATCCTTTATGTGGCCTTGTTCTAGATTATTTGAATGTAGACAATAGATAGAGAGAAATGCTTACATAAACTTGAAGTGCCCAAGTTGAGTG CAGTAAGTCAAATACATCATTAATTATGGTTAATTTTGATAATTAATTATGATATGTATCTATTAATCAATTGTGCAATGGCTCAGTGCACTCAAGTTCA GTGATTTAAGTTTATGCAAGAATTTCTCATGGATATAAATGGAATTGTAACTGATAGTGATGCCTGATGCAGCATTTTGAGATACTGGTGGAAGAACACT TCAGGAAGCGCTCCCGACATATACTTCGTGCTCGTAAGGCATGTCTTGAAGGAGCTCCCATTGGATGTGCTTTTGGAAGTGGAAAAACTGAACATGAAAA CCAAAAGGGAACTTCTACAGGGTTCAAAATTATGCTTGCTAAGATCTTCCCCAAGCTTGTAGAGGCATTTTCTGATAAAGGAATTGATTGCAGTCAGTTT GTTGATATGCAGAAATAACTCTCATGCTAAGTTTTAAGTAACTCTTCAAGTTTCCCAACCAGGATATTGCAACCTTAAGTGTAATATTAATATATTTACA GGTATTTGTATAATATCAAATGTAACCTTGTTAAAGCACCAATCTCTTGAATAAATTAAAGTATGATAAAATGTCATTTTCTCTAGTGTTGTTACAACTA GTCTATTATAACTCTC BLAST |
Tissue | flowers |
Gene name | LI_gene_33536; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_129890
Blastp | Probable ubiquitin-conjugating enzyme E2 24 from Arabidopsis with 42.95% of identity |
---|---|
Blastx | Probable ubiquitin-conjugating enzyme E2 24 from Arabidopsis with 42.95% of identity |
Eggnog | ubiquitin-conjugating enzyme(ENOG410XQ7W) |
Kegg | Link to kegg annotations (AT2G33770) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019423805.1) |
Pfam | Ubiquitin-conjugating enzyme (PF00179.25) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |