| Id Trinity | FTRINITY_DN53409_c1_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_129884 |
| Sequence | ATTCTTTCCCACCATTGGTTGAAGTGTTGTTAAACAAAAAGAACCCACCATCTCGAACTAAACTAGTTACTTCCCTCATTCACTAAACGTGTCTTCTTTG ATTTTCACTAATGTTTTAGAGAGAGTGAGAGTGAGAGAGAGAGAGTGAGAGAGAGAGAGTGAGAGAGAGAGAGAGAGACTGTGATGGCTCCAAACTTGGG TGGTAGAGTGGAAGATGGTGGCACTGGGCGAGGAACAAGACCTATCTGAACATAACCCACCTTTTCAATTTCCAAAAAGATTCATTTTTTTTCTTCCTTT CAATCTCTTATGTTCTGGGTTTGGATTTTCTTCTTTCAACATGTGATTCAGGTTTAAAAGAAATGATCTGTTAATAGGAGCTCTTCTGACTTTTGGCAAT GGAAATTATGCTTCAAATTCGACTTTGTTCTCTCAGACAGATAATCTGATATCTTTACACTTGCTGTGAATCAAGGAGCCTTAAGTATATTTTTGATTGG TTATTTGTGCTGAATGGTTAAAGCTTCTTCCAAAATTTCATCAGCTACTAAGCAATCAATCTCCTTCGATTACCAGATTTTGGCTTCGTCGTGGAGCCGG GCAAATCTCCTTTGGCAATATAGCTTCCAAGCTCCTATTTTGGAAGAGGAAAATTTATTAACCTTCTATACTTTACTTGTGTTTGAAGATTCGGCTATAT TGGGCAAATCTCCTTTGGCAAATTACTTAAATCCTTTGGTTTGGTTCCTAGCAGTGAAACTATATGAAATTAAATTTTGTCGGCTTTCTGTAACAGTTTT ATCTTGCTGAAGTCATTCCACTAGGAACTTCACACTTTCATCTGGACAAATCTCCTTTGGCATCTTTTGGTTACCTTGGTTTGCTTCTTCCAGCTTCTAT ATCTTTTTCTTCCAGAAAACCACAAAATAATCGTCTTATAGTTTTAGCTCCTTGATACTTCTAGTGTCGAGAAACTTATCTCAGGAATTTCTTTCTGTTG GAAGTTCCAGTCCAAATTGGGCAAATCTCCTTTGGCATTTTGGAGTCGTTCATCGATTCCTGTTATCCTATCAGACAAATCTCTTGGCATCAAATCTCTG GTTTCAGTGGTCAAGATTATCTTTTTAAGAAACTAGCTTACTATCTGTGACAAAAGCAGTATCAATCACATACATGTTGTGTTTGTACAAAAATAGACTT GAAATCAATATCTCCATCGTGGATCGCAATATATACTGCAACTGAGGTTTAGTGCTTCAATTTACTTGAGAAGGCACCTATTGGTAGATGCTAAAATGAC TGATTCCGACTCAGACACTTTCAGTGAGAGCAGCGGTAGTGAGGATCAAGAGGATATTGATTATCTATATGGTGGGCAAGCACGGAGCATATTATCAAGT TTAGAGGAAAGCATCGGGAAGATCGACGATTTTCTCTCATTTGAGAGGACATTTGTTTATGGCGACGTGGTCTGCTCCTTGTCAGACCCATCTGGACAAA TGGGCAGGGTCACAAGTGTTGATGTGTTAGTGGACTTGGAAAATGTTCAAGGAAACATATTAAAAAATGTGAACTCCAAAACACTTCTGAAGATCCGATC CATTTCAGAAGGTGATTATGTAATTAAGGGGCCGTGGCTTGGCCAGGTTCAAAGGGTGGTGGACAAAGTGACTGTGTTGTTGGATGATGGATTGAAATGT GAGATCACTGCTTTGGGAAAAGATAAGCTTTTACCAATGACTCATCATTTTCTTGAAGACTCGCAGTATCTATACTATCCAGGGCAGAGAGTAAAGGTGA ACTCTTCCACTGCTTCTAAATCAGCTACATGGCTATGTGGTACCTGGAGAGACAATAAAGATGAAGGAACAGTTTGTGCTGTGGAAGCAGGTTTGGTGTA TGTTGAGTGGCTTGCCTCTGCTCTTTTAGGTTCCGATTTTAATGCGAGTTCTCCACCATCCTGGCAAGATTCTGAAAACTTGACCTTGTTGTCGTGTTTT TCACATGCAAACTGGCAGCTTAGTGACTGGTGCATGCTTCAAGTTGCAGACCAAAAGGAACATATGGAACAGGTAGATCTTTCTAATGAGCATGGTATGG CAAGAGGATACACGAGAAGAAAACTCAACTCTAACGTTGGGGAATTATTTATAATTGCAAAGAAAAAGACCAAAGTTGATATTATATGGCAAAATGGTGA ACATACATTGGGATTAGATCCGCAGAACTTAGTCCCAGTGAATGTCATTAACACACATGAATTTTGGCCTCACCAGTTTGTGCTGGAAAAAGGTGCTTCT TATGATCCTCTTAACCCTAGAAGTCAAAGATGGGGTGTTGTCCAATGTGTGGATGCAAAGGAGCATATTGTGAAGGTACAATGGAAAACTGCTTCCATAT CCGACCCAGATTATTTGGATGGAGGAAAAATGGAGGAGACTGTGAGTGCGTACGAGCTTATAGAGCACCCAGACTACTCCTTTTGTTTTGGTGATATTGT GTTCAAGGCGGCTCAAAAACAGCTTGGTTATCATGCTGAGAAAGATAATGCAAAGTCAGTGATTGACTTGAATGCGGAGGCTGCTCTTAAAGACAGGAAC CGAAAGGGCTATCAGGATGAGTTACCTGATAACCGTATCCTATGCTGTATTGGCAATGTTATTGGTTTCAAAGATGGTGAAGTGCAGGTGAAATGGGCTA CTGGTTTCACAACCAAGGTTGCGCCTTGTGAAATTTTTCGGATCGATGAACATGAAGGTTCAAATGTTGAGCAGTTAATTCAAGGGATGATTGAACATGG AAATTTACCTTCTCAACAGAAGGGAAAGGACATGTCAAATTGTGATGGCATTAGAGAGAATTATGAAAAGTATCCACTTGAGTGTAGTTCCTTTTCCTTT CCCCAAGCTGCCTTAGAACTTTTCTCAAGCATCAAAACAAGTATACTCCAAACACTTGGTGGAACATCACTTTCAGCAGTTTCCTCAGTACCTACATTTG AAGAGGATAATGGATCTGATTTTATTGATAAGCAGAATTTGGAAACTCGTGACCATTGCACTGAATCACATCCAAATACTCAGTTGCAATCTGCTGAAGA TTGCACTTCATATCCACAAGTTATTAGGATTCATGAGAAGATTGATTTTCCATTTTCTTCAGACAGCAACAGTTCAAACCAGTTTAAGCAGTTTGACGTG ATAGAAAATTGCTCTGACCACTACTTTTTGGATGAGGGAGAAGGGTTGAAATTATCTCAGATTAAAAGAAGTTGGATGAAAAAGGTTCAACAAGAATGGA GCATCCTCCAGAAAAATCTTCCTGAAACTATTTATGTTCGTGTTTTTGAAGAAAGAATGGATCTCATGCGAACGGCAATTGTTGGTGCACGTGGAACCCC TTATCATGATGGGTTGTTTTTCTTTGATATACATTTCCCTCCAGAATATCCAAATGAACCCCCTATGGTGCACTACAATTCTGGTGGGCTTAGATTAAAT CCTAATTTGTATGAGTCAGGGAAAATCTGTCTCAGTCTCCTGAACACTTGGACTGGTACAGGCACTGAAGTGTGGAACCCTGGAGCCTCCACAATTCTTC AACTCCTTCTCTCTCTGCAAGCCCTTGTCCTTAATGACAAGCCTTATTTCAATGAGGCTGGATATGACCAACAAATCGGCCGAGCCGAGGGAGAGAAAAA CTCAGTCAGTTACAATGAGAATGTTTTCCTTGTCACAAGCAAATCCATGTTGTATCTATTAAGAAAACCACCCAAGGTAGAATTACTACATCTATAATTT GATTTCTTCCATAGTTGCAGTTTATTCAGTGATAATGGCCTTGAAATAATAGAGAATAATTCTGAGTGGCATTACCAGTTATTTATGTGTTGACCATGGA TTTAAGCACAATATGCCAGATGTGTCTCAGAACACAATAAAGACATTGGACACTGCTAGTACCAGGATATTTTTGCATGGTTAAATGAAATATATAATAT CTCAAACAAAGAGGAGGTTGTTTGTTTGAGATAAAAAAATTCAAATGTCCTATAATATATACATAAATATACAATAACAATCAAACCTTAATTCCATGTA ACCAACCTCATCTAGTGGAATTAAGGATTGGTTATTGTTGGGTATTTTTGTATAAATATTATAGGGCGAGTCTCGATGCAACGATAAGGTGATTTGCTTT GTGACTTGGAGGTCATGGGTTCTAATCTTAGAAATAGTCTCTTCGCTTGTGAAAGTAAGATTGCATACATCTACTCTCCCTTGACCTTACTACGTGGGAG CCTTGTACGTTGGACTACTTTTTTTATATTCATGTATATTGAGTTTGAGCTTCTGGCATGTCCTTGAGTTTCTGCAGGTTTTCAATTTATTCTAGTAGAT TAGATTAAAGCTTTCAGGGTTTGGATCCTTTATGTGGCCTTGTTCTAGATTATTTGAATGTAGACAATAGATAGAGAGAAATGCTTACATAAACTTGAAG TGCCCAAGTTGAGTGCAGTAAGTCAAATACATCATTAATTATGGTTAATTTTGATAATTAATTATGATATGTATCTATTAATCAATTGTGCAATGGCTCA GTGCACTCAAGTTCAGTGATTTAAGTTTATGCAAGAATTTCTCATGGATATAAATGGAATTGTAACTGATAGTGATGCCTGATGCAGCATTTTGAGATAC TGGTGGAAGAACACTTCAGGAAGCGCTCCCGACATATACTTCGTGCTCGTAAGGCATGTCTTGAAGGAGCTCCCATTGGATGTGCTTTTGGAAGTGGAAA AACTGAACATGAAAACCAAAAGGGAACTTCTACAGGGTTCAAAATTATGCTTGCTAAGATCTTCCCCAAGCTTGTAGAGGCATTTTCTGATAAAGGAATT GATTGCAGTCAGTTTGTTGATATGCAGAAATAACTCTCATGCTAAGTTTTAAGTAACTCTTCAAGTTTCCCAACCAGGATATTGCAACCTTAAGTGTAAT ATTAATATATTTACAGGTATTTGTATAATATCAAATGTAACCTTGTTAAAGCACCAATCTCTTGAATAAATTAAAGTATGATAAAATGTCATTTTCTCTA GTGTTGTTACAACTAGTCTATTATAACTCTC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_33536; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_129884
| Blastp | Probable ubiquitin-conjugating enzyme E2 24 from Arabidopsis with 49.34% of identity |
|---|---|
| Blastx | Probable ubiquitin-conjugating enzyme E2 24 from Arabidopsis with 49.46% of identity |
| Eggnog | ubiquitin-conjugating enzyme(ENOG410XQ7W) |
| Kegg | Link to kegg annotations (AT2G33770) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019423805.1) |
| Pfam | Ubiquitin-conjugating enzyme (PF00179.25) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |