Id Trinity | FTRINITY_DN53427_c0_g3_i6 |
---|---|
Name Transcript | Ll_transcript_128247 |
Sequence | GTCCTTTTCATTTTCTCTCTAACTTCTCACTCTCATAATTACTTCCAATTACGTCTTTACCTTTTATTATTTCTCATAAAAAAACTGATTTTTATCATTT GGGTACTCGTCTTTTTCATCAATTTCAAAGACCCGTGTTCCAGAAATTGAAGTTGAATTTCATTATTGTTTTCTTTAATAATGTTTAAGCTAATTCTTGT TTCAATGTTTTTGTAAAGGGAATACTTCATTGTTTGAAATGTTTTTTGTACTAAAAATGTGAATTTGCGAAAGTGATTTTGTGATAGGTTAAAAAATATA GATAAGCTTTCACTTTTTTTTGTTGCAGTTTCTGCTTTTTTTTTGTAGAAGCATGTAAGTGGCAGAAGTGAGTTCTTCTTCAATAATTTTGTGAAGTGAT AATTTGGAAGGCTATTGTTTAAGCTTGTGAAAGTGGTTCTTCCAGAAGTGGTTTGGGCTAAAGAGATTTTTTGATAAGCTGAAAAATATAGTTTCTCAAA AAGTCGAATTTAGATATTTTTTCTTTGCAGTTTCTGATTTTATGAATTACAGCCCAACAAATGTTCAAGTGTTAGATCATAATCAAAGTAATGACTTTTT TGTGTGAAAGAAGTTTAAACAATGGAGCCCTTACTATATTCTTTTTTAGTTGTTGTAGATTAGGCACATGTTTCAGTGGTTGGATTAATTCTATTGAGTT TGTGGTAATACCAATTGATGACAGGTTCTAAAGTGGGAGGATGTTGAAATTGGAGAGCCGAAAGAAGGAGAGGTCCGTGTAAAGAACAAAGCCATTGGAA TTAACTTTATTGATGTCTACTTTCGTAAAGGAGTTTATAAAGCCCCCTCTCTCCCCTTTACTCCAGGTTTCCTAATTTGATTTACTTTCTAACAAATGAT TTTGTATGTGATATTTCTGGTGATTGTGAATAAAAAAGGACAAAAAATACGGTAGAAGGAAGCCAAATTCTTTGTACCATAATGCTGTTAATGACCTGGG TAGTTGTTAATTATGTGTTTAGTTAATCCATGTAGGCGTAGCAATATGCGCTATTACTATAAATTATTTAGCTTCATCTAGCTCCTGGGCGTTCGTAGTT TCAATACTGAAGAGAATTTGTTTATGGATGATTTGACTTGTAATTGGTTGTTTCACTAGGAGGTTAATATTGAATCAAAGTTAAGGAATATTTTGCAATG AATTTTATATGTTTACGTAAAGGAAAAATTTGAGGGTGAGCCTTGGCACAACCGTGAGATTGCCTCCTTTTGGCCTGGAGGTTATGGGTTCAAATTATGT AAGCAACCTCTTCGCTTGCGGGTAAGACTTCCAGTGGGGTTGAAAGCCCTTGCCAGTTGAAGTCTGCCACACATGGAGCTCAGTTTGTCAACTGAACCAC ACCTTGGGGTTAGTGTTACTTTACTATGAAGGTTTTAAAAAATGAACAATTAGTACAACTATTTAGCAGCATCTGTGTTTTCTCGGATGTTCTATGTGAC TAATTTCTTCCCCTCTTGATTTTTGTTTGTTGAAGACACTAAGTAAAAAAAATGATCTTTGGCATAGAAAACAGGTAAACGTTCTCTGTATAACCTTTTT AAATCAAATCATTTCTATATAACACATTGCTTATTGAATGATTACAAAACTAAGTAGAGCACTTGAACTTTGGGGTACTTTTGTTTGACACACTATTTCA CTTGCTGGAGAAGAACACTTAGATTCTTCAATGCTTATATTTGGTGCACAAGAGTCAAGAATTACTTCATCATCATATGCATTGATGATTACTTAACTTT TCATGGCAAGCTCAGTTGATGCCCAATGGTTCATGTATTGAATTATTTTTCCCTTTTAATGTGGCAGGTATGGAGGCTGTTGGGGTTGTGACAGCTGTGG GTGCGGGACTCACTGGTCGGCAGGTTGGCGATCTCGTAGCTTATGCAGGCCAACCAATGGGCTCATATGCTGAAGAGCAGATTCTTCCCGCAAATAAAGT AGTTCCTGTTCCTCCCTCAATTGACCCAGTTATTGCTGCATCTGTCATGCTGAAGGGTATGACAGCTCAATTTTTGCTTCGACGCTGTTTCAAGGTAGCG TTCTATATTGTGTATTCATTATAGCTAAAAGAATTGTATTTTGTGCTGTGCATATCTGGGTTGACGATAAACCGAGACTATACACATGACTTTATAGGTT GAACCTGGTCACACAATTCTTGTCCATGCAGCAGCCGGTGGAGTTGGATCTCTGTTGTGCCAGTGGGGAAATGCTCTGGGCGCAACTGTTATAGGAACTG TGTCCAGTAAAGAGAAGGCAGGTCAGGCCAAGGAGGATGGCTGCCATCATACTATAATCTATACGGAAGATGATTTCGTTACTCGCGTCAATGAAATCAC ATCAGGCAATGGAGTTGAAGTAGTCTATGATTCTGTCGGAAAGGATACCTTTGAGGGATCTTTAGCATGCTTAAAGCTTCGCGGCTACATGGTGAGTTTC GGGCAGTCATCAGGTTCACCCGATCCGATTCCATTATCTGCCATAGCTACAAAATCTCTGTTCCTGACAAGGCCTACCCTAATGCAATACGTGGTCACTC GGGATGAACTATTAGAGGCTGCTGGAGAGTTGTTTGCAAATGTTGCTTCTGGTGTGTTGAAGGTGCGTGTGAATCATACTTACCCTTTATCTGAGGCTGC AAAAGCACATGAAGACTTGGAGGGTAGGAAGACCTCAGGATCTGCAGTGTTGATACCCTGAGAAGGTGTAGTTCCTCATCACCAAGTCCTTGGTTGATTA CTGTTCAATGGAACTATAGATTTTGAATAATATTATTAGTACTACTGTATGTTATGCAATATGCATTGGGATAAATTTAAAACGAATAAGCTGTTACTTG TTAGTGATTTTCTTAACATAACAGCTAGAAGGGTAGAACATCCAAACCTTAATCTCCATGTGAGTTTGAACGATGTTATAATGCTCTATCATAAGTCATC TTTATTTACAAAGTATTGATATCTAAATCTTTTATAATCATTTTGCGTGTATTTTTTTCTTGGCCTCAATCTTCCTCTAGAAATTAGGTTAACAACCATT GGATCTACTTTCCATAATGGGGTGCATATCCAAACCACGTAAGGCACAATTCTACAATTTTTTATAATCCTATATTGTCT BLAST |
Tissue | flowers |
Gene name | LI_gene_33667; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_128247
Blastp | Quinone oxidoreductase from Pseudomonas with 48.05% of identity |
---|---|
Blastx | Quinone oxidoreductase 1 from Escherichia with 52.04% of identity |
Eggnog | alcohol dehydrogenase(COG0604) |
Kegg | Link to kegg annotations (PA0023) |
CantataDB | Link to cantataDB annotations (CNT0000309) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019435326.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |