Id Trinity | FTRINITY_DN53437_c1_g1_i13 |
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Name Transcript | Ll_transcript_128657 |
Sequence | GGGCACATTGCCTTATCACATATGACCTTGAAAAAGATTATCCAAATGTAATCAAGTGGTCAATCTCTACAAAATCACCCTGCCCCACCAATCATCATTT CATTTCATTTCACATCCTCTAACTTTGCAACAACACTACCCATCATCATTTTATCACTATCCTTATACTCATGGCCATTGCTCAAAAATGGCTCACACAC TTATCCAACACTAGACACAACAATCTCTTTGCTTCAAGGAAGCAACAACAACAACCCATGTGTTTCATCCAACACCATAGGCTTGTGTGCCATGGGTGCT ACCTTTCAATGAATGGTTGCATAGAAGGACAAGACAAGGAAAAAAACCATGTTGGAACAATAGAAACAAGAACATTGGAACCAGTTACATCACTTGCAAT GGCTATGTATAACCTTAACAATGCAATTTCACAATTGAAAACAGAGCCACCATTTTATACCTCTTCAGGAATTGTAAGGTTGCAGGTTCCAATTGAAGAG AAGGTTGAGGCCATTGATTGGCTTCATTCTCAGAACCATCTTCTCCTTCCTCGTTGCTTCTTCTCTGGGAGGGAACAAAATGAAGATAACTTGGTCAGTG TTGCTGGTGTTGGTTCTGCTGTTTTCTTTTGCCATTCTCATCCCTTTTCTTATTGGGATTGGAGATCCATAAGGAGGTTTCTTTCTGAGAGATGTCCATT AATCCGTGCATATGGAGCTATCCGTTTCAATGCAAAAGCTAAGGTCTCATCAGAGTGGCAGGCTTTTGGTTCTTTCTACTTCATGATTCCTCAGGTTGAG TTTAATGAGCTTGAAGGAGGATCAATGCTTACAACAACTATTGCATGGGATAATGCTCTTTCTAGGACATGGGAAAATGCAATCAATGCACTTGAAGCAA CATTTTGCAAGGTTTCTTCTTCCATTGTGAAGTCCCCTAAACAAGCTCCTCCAACATTAATATTAAGCAGCCATAACATTCCCAGCAGAGTAGATTGGCA TCTTTCTGTCAATAGAGCTTTGCAGATGATAAAACAAAATGATTCCTCACTAACCAAGGTTGTGCTAGCTCGTAGCACCAGAGTTGTGCCCACTGCTGAT ATTGATCCTCTGAAGTGGTTAGCTTGCTTAAAGGATGAAGGTGCAAATGCTTACCAGTTTTTCCTTCAGCCTCCTAATGCACCTGCATTTATTGGAAACA CACCAGAGCAACTATTTCACAGAAAATCTCTCCACATTACTAGTGAGGCTTTGGCTGGAACCCGTGCTAGAGGATTGTCACCTGCACTGGATTGCCAAAT TGAACTAGACTTACTTACCAGTCCAAAGGATGACAATGAGTTTACTATAGTGAGAGAAACCATAAGAAGAAAATTAGAGGCAGTATGCGAAAAGGTTGTA ATCAAGCCAAAGAAAATGATAAGAAAGCTCCCCAGAATCCAACATTTATTTGCTCAACTAGCTGGCAGGTTAGAAAGGGAAGAAGATGAGTTTGAGATCA TGTCATCTCTTCATCCAAGCCCAGCAGTGTGTGGGTATCCAACAGAAGAGGCACAACTTTTAATTGCAGAAACAGAAGTATTTGATAGAGGGATGTATGC TGGACCTGTTGGTTGGTTTGGAGGAGGAGAAAGTGAGTTTGCTGTTGGCATTAGGTCAGCATTGGTGGAAAAGGATCTAGGTGCATTGATATATGCTGGA ACAGGAATAGTAGAAGGAAGCAATCCTTACTTGGAATGGGATGAGCTAGAACTGAAGACATCTCAGTTCACCAAGTTGGTCAAACTTGACTTGCCTCTCA TCCAAAAAGTAGATTGTAAGTAAGCTCCATCAAACTGATAAGGTTAGCACTTCTCATGTCAATTTATTGTCTTTTAATTACAAATGCAAGCAGAGCTTAA AATTGTTATTAATTTTACATTTTTAGGTTGACAATATAGAAAAAGTTTATGAACAGTTTTAAAATATTTTTAAAACAATATTGATGGAGGAGACCGTTAG AAGTTATCACTAAACAAAACAGTTAGGTTAGTCCGATTTGTAAAGATAGAGGGAGCCAAGAAAAACCATAAGTAAAATGTTTAAGAAAGATTTAGACATA AATGTTTTGTCAATGAACATGATATATGATATCGTTCTATCCATATAATCGACTACCCCTAGAGAGGATCATGGTTTAGTTGTTGTTGATGCCTAGCTAG CAAAGATATGTTGGGGCATGGTGATTGATCGATTTTTCTATATCAATCTGCATTGAATTAAGAGGAACTTATATCGACTCCCATTAATGTATGACTTAAA TATACTCACATTTCTTGTTTAAAAACATTAGATAATCTCATACAAGGTTGTTTAAAAACATTAAATAATCTCCAAGGGTTATATTGTCATTACACTTGCT CACCAATGTTTTCTATCATCACACTCATAGTCTTAAGGTTCATGTTAGTGGTAAAACTTACGTCTAGATTTTGCAAAAGTGACTCTACATAAATTGATTT ATAGCAAAATTATAGTTATTGTCACCCCTATGAACTATGTACCAATTCACGGTACTTTTGCGACTCGATTCATTACAGTTGGCAACTTGGTTCGAAGCCG TTAGAGAACCTATCCATGGATGCTTCACGTACTCCAAACTCTAAAGATAGGTTTCACTATATTTAGAGCTTATTTATGGGTGGACCCATTTGAGCTTATT TATGTGGGTTGGCCTAGTTTATTTTTGTAGATGCACCACTTAGAACTTATTTTTATAGGTATTGGACTACTAAAGTTCTGAAATTAGATTTTTTGTCTCA TTTTAATTTATATTTAAAAGTTGAATTTAAATTGATTATACATAATAATAGTTGATTAACGTATGAACTTATTTGCATAACTTAATTTTAATGATTTTTT CTTATAATTAACCTCTAACTAACAGGTAAATAAAATATTAGAACGTCAACTAAAAAGTATCACGAAACCAACTAATATATTGGCTAAATATACCTCTAAC ATACTCTATATTTGAGAAGTAGCATATTGCGTGCCGCATATTCATAGCTGTACCATAAAGTACCAAAACCTTGGTGACTATCAGCAAAATGGGAGGGGAT CAACTTACTCCAAGAATAAGTTTTTTTACGTTTACTCTTCATCTTAGCCATCAATTTATTGGAAATCCAATAGTTTAGATTTACTACTAATTCAAATCAT TGGATTTCTCTAGAATTGATTTTTAAGATGAGAAGTAACTTGATTCCTCCCGAACAAAATTGTTTGATTTACAAATGACACATTGGTGTACTGATTCCAA ATAGTGCAGGACATTAATTTGTTCCAATTGTAAGCATGAGGCTTCTATTGTATCCATAAGCAGAATCTCCAAATTGAACTTATTTAAAATTATGTGTATT TTTCGGTATGAACTGATTGGACAAAGATATATTTGTCCCAAATTTTATCCTAAACCAATTACATTATGTCACATCAGTTGAAAAATAAACATTAATAATT TTATCTATTTTTTTTTATTATGAACGACCTTATATAGGTTTGGGGACAGCAAATCCTGTCCGAACTGGTTTTCCATGGCATAAAGAATAATCTTATCTTT CTCTATCTCTAAGTCGTAATACAAATGCTAATTCCTCTTTTGGTTTTGCAGTTTTCCTCAACTTTGAGATTATTTGCATCTATTAGCTTAGTATTTTTGC AACTCGGGGATGGTGTGGAGCTTTGGATAATAACATTTACAATGAACAAATATTAGTTACTAATTTATATGATGGACTTAATTTGTTGCTCGTTAGACTT TGGTTGTATTCATTGGCTAAGAAGCCACTACAGCAATTTTTTCCTGTAATACTTTAGGGATATATATACTCTTGAGTAAGGCAGATAAAATATGGGTCTT CCTTTTGTGATGGATGTGTTATTAATGTATTTACTAAAAGTTGG BLAST |
Tissue | flowers |
Gene name | LI_gene_33725; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_128657
Blastp | Isochorismate synthase 2, chloroplastic from Arabidopsis with 60.12% of identity |
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Blastx | Isochorismate synthase 2, chloroplastic from Arabidopsis with 60.12% of identity |
Eggnog | isochorismate synthase(COG1169) |
Kegg | Link to kegg annotations (AT1G18870) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019464663.1) |
Pfam | chorismate binding enzyme (PF00425.17) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |