| Id Trinity | FTRINITY_DN53437_c1_g1_i17 |
|---|---|
| Name Transcript | Ll_transcript_128661 |
| Sequence | GCCGAATTCGTTCTAACTATGTATGTAATTATGGGCTGCACCAACACTAAGGGTCATACATTTGTGTCTGTGTTTTGTATTCAGAGGCTTGTGTGCCATG GGTGCTACCTTTCAATGAATGGTTGCATAGAAGGACAAGACAAGGAAAAAAACCATGTTGGAACAATAGAAACAAGAACATTGGAACCAGTTACATCACT TGCAATGGCTATGTATAACCTTAACAATGCAATTTCACAATTGAAAACAGAGCCACCATTTTATACCTCTTCAGGAATTGTAAGGTTGCAGGTTCCAATT GAAGAGAAGGTTGAGGCCATTGATTGGCTTCATTCTCAGAACCATCTTCTCCTTCCTCGTTGCTTCTTCTCTGGGAGGGAACAAAATGAAGATAACTTGG TCAGTGTTGCTGGTGTTGGTTCTGCTGTTTTCTTTTGCCATTCTCATCCCTTTTCTTATTGGGATTGGAGATCCATAAGGAGGTTTCTTTCTGAGAGATG TCCATTAATCCGTGCATATGGAGCTATCCGTTTCAATGCAAAAGCTAAGGTCTCATCAGAGTGGCAGGCTTTTGGTTCTTTCTACTTCATGATTCCTCAG GTTGAGTTTAATGAGCTTGAAGGAGGATCAATGCTTACAACAACTATTGCATGGGATAATGCTCTTTCTAGGACATGGGAAAATGCAATCAATGCACTTG AAGCAACATTTTGCAAGGTTTCTTCTTCCATTGTGAAGTCCCCTAAACAAGCTCCTCCAACATTAATATTAAGCAGCCATAACATTCCCAGCAGAGTAGA TTGGCATCTTTCTGTCAATAGAGCTTTGCAGATGATAAAACAAAATGATTCCTCACTAACCAAGGTTGTGCTAGCTCGTAGCACCAGAGTTGTGCCCACT GCTGATATTGATCCTCTGAAGTGGTTAGCTTGCTTAAAGGATGAAGGTGCAAATGCTTACCAGTTTTTCCTTCAGCCTCCTAATGCACCTGCATTTATTG GAAACACACCAGAGCAACTATTTCACAGAAAATCTCTCCACATTACTAGTGAGGCTTTGGCTGGAACCCGTGCTAGAGGATTGTCACCTGCACTGGATTG CCAAATTGAACTAGACTTACTTACCAGTCCAAAGGATGACAATGAGTTTACTATAGTGAGAGAAACCATAAGAAGAAAATTAGAGGCAGTATGCGAAAAG GTTGTAATCAAGCCAAAGAAAATGATAAGAAAGCTCCCCAGAATCCAACATTTATTTGCTCAACTAGCTGGCAGGTTAGAAAGGGAAGAAGATGAGTTTG AGATCATGTCATCTCTTCATCCAAGCCCAGCAGTGTGTGGGTATCCAACAGAAGAGGCACAACTTTTAATTGCAGAAACAGAAGTATTTGATAGAGGGAT GTATGCTGGACCTGTTGGTTGGTTTGGAGGAGGAGAAAGTGAGTTTGCTGTTGGCATTAGGTCAGCATTGGTGGAAAAGGATCTAGGTGCATTGATATAT GCTGGAACAGGAATAGTAGAAGGAAGCAATCCTTACTTGGAATGGGATGAGCTAGAACTGAAGACATCTCAGTTCACCAAGTTGGTCAAACTTGACTTGC CTCTCATCCAAAAAGTAGATTGTAAGTAAGCTCCATCAAACTGATAAGGTTAGCACTTCTCATGTCAATTTATTGTCTTTTAATTACAAATGCAAGCAGA GCTTAAAATTGTTATTAATTTTACATTTTTAGGTTGACAATATAGAAAAAGTTTATGAACAGTTTTAAAATATTTTTAAAACAATATTGATGGAGGAGAC CGTTAGAAGTTATCACTAAACAAAACAGTTAGGTTAGTCCGATTTGTAAAGATAGAGGGAGCCAAGAAAAACCATAAGTAAAATGTTTAAGAAAGATTTA GACATAAATGTTTTGTCAATGAACATGATATATGATATCGTTCTATCCATATAATCGACTACCCCTAGAGAGGATCATGGTTTAGTTGTTGTTGATGCCT AGCTAGCAAAGATATGTTGGGGCATGGTGATTGATCGATTTTTCTATATCAATCTGCATTGAATTAAGAGGAACTTATATCGACTCCCATTAATGTATGA CTTAAATATACTCACATTTCTTGTTTAAAAACATTAGATAATCTCATACAAGGTTGTTTAAAAACATTAAATAATCTCCAAGGGTTATATTGTCATTACA CTTGCTCACCAATGTTTTCTATCATCACACTCATAGTCTTAAGGTTCATGTTAGTGGTAAAACTTACGTCTAGATTTTGCAAAAGTGACTCTACATAAAT TGATTTATAGCAAAATTATAGTTATTGTCACCCCTATGAACTATGTACCAATTCACGGTACTTTTGCGACTCGATTCATTACAGTTGGCAACTTGGTTCG AAGCCGTTAGAGAACCTATCCATGGATGCTTCACGTACTCCAAACTCTAAAGATAGGTTTCACTATATTTAGAGCTTATTTATGGGTGGACCCATTTGAG CTTATTTATGTGGGTTGGCCTAGTTTATTTTTGTAGATGCACCACTTAGAACTTATTTTTATAGGTATTGGACTACTAAAGTTCTGAAATTAGATTTTTT GTCTCATTTTAATTTATATTTAAAAGTTGAATTTAAATTGATTATACATAATAATAGTTGATTAACGTATGAACTTATTTGCATAACTTAATTTTAATGA TTTTTTCTTATAATTAACCTCTAACTAACAGGTAAATAAAATATTAGAACGTCAACTAAAAAGTATCACGAAACCAACTAATATATTGGCTAAATATACC TCTAACATACTCTATATTTGAGAAGTAGCATATTGCGTGCCGCATATTCATAGCTGTACCATAAAGTACCAAAACCTTGGTGACTATCAGCAAAATGGGA GGGGATCAACTTACTCCAAGAATAAGTTTTTTTACGTTTACTCTTCATCTTAGCCATCAATTTATTGGAAATCCAATAGTTTAGATTTACTACTAATTCA AATCATTGGATTTCTCTAGAATTGATTTTTAAGATGAGAAGTAACTTGATTCCTCCCGAACAAAATTGTTTGATTTACAAATGACACATTGGTGTACTGA TTCCAAATAGTGCAGGACATTAATTTGTTCCAATTGTAAGCATGAGGCTTCTATTGTATCCATAAGCAGAATCTCCAAATTGAACTTATTTAAAATTATG TGTATTTTTCGGTATGAACTGATTGGACAAAGATATATTTGTCCCAAATTTTATCCTAAACCAATTACATTATGTCACATCAGTTGAAAAATAAACATTA ATAATTTTATCTATTTTTTTTTATTATGAACGACCTTATATAGGTTTGGGGACAGCAAATCCTGTCCGAACTGGTTTTCCATGGCATAAAGAATAATCTT ATCTTTCTCTATCTCTAAGTCGTAATACAAATGCTAATTCCTCTTTTGGTTTTGCAGTTTTCCTCAACTTTGAGATTA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_33725; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_128661
| Blastp | Isochorismate synthase, chloroplastic from Catharanthus with 57.2% of identity |
|---|---|
| Blastx | Isochorismate synthase 2, chloroplastic from Arabidopsis with 60.12% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (CAA06837) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019464663.1) |
| Pfam | chorismate binding enzyme (PF00425.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |