| Id Trinity | FTRINITY_DN53459_c0_g5_i5 |
|---|---|
| Name Transcript | Ll_transcript_128626 |
| Sequence | GTTTCATTCTCCAAAATCATAGTTCAAAACTTCTTGATCTGTATCACATATCCTTTTCTCATAGGAACCCTCCATTTTCTTAATTCAATCAAACTTTTCC CTTCGCTTTAGTCATATTCACGAAAATAAAAATGTTGGGTTTCAAATCATATTTTTTCTTATTCTAATCCTAATGCATATACATTTTTTGGCTTTCACCA ACGACCTTAAAGATTTGATTTTTCACCAATGCGTGCTGCAAAATCGGAAATTTCCATCAACCCATTTAAATTATCCATATCAATTTCATGTTGTTCTCTA ACATTACTTCGAAATCTTCGCTTTCTTCCATAACCGAGATCTAGGTTTTCTCATCCTGTTCCTCCCACATTCTCCTCATACCATGGCTTGTGTTTTAGAA ACCAATGTTTTCGTGTTTAATTGATTATTCCCTTCATGGGTTCCTTCTAAAGGCTCGAAATTTATCGGTTTCAGCTACTGGGTCATAATCATCATTATGC TCAAGCAATTCCTGAGTAAACTTCCTAGAAAGGCATCGAAACTTGACACGGACGAGTCAACCCGGGTCAATTCGTTGCGTTCGGACTCTCCGGCCGGAAA AAATCTCCGGCCACACGGCGATAATAATAGCAATACAGCGAAAAGAACATCATTGTCGGCGGTTTTTCCATCGAGCACCGTGGCTGGGATTGAACCATTG TTACCGTTTAAGGATGTTCCAAATGGTGAAAGGATGAACCTGTTTGTGAGCAAGTTGAGCCTTTGTTGTGTGATCTTCGATTTTAGTGACCCGGGTAAAA GCATAGTTGAGAAAGATGTAAAGAGGAGAACTTTGGTTGAACTTGTTGATTTTGTGGCCAATGGGAACATGAGGTTTAGTGAACCTGCTACCCTTGCTAT GTGTAGAATGTGTGCTGTTAATCTCTTTAGAGTTTTCCCGCCAAATTATGGGTCGAATCGCGGTGGTGGTGAGAATGATGATGATGAACCGACTTTTGAT CCTGCTTGGGCACATTTGCAGCTTGTGTATGAATTGTTGCTTAAATTTATCAGTTCTCCTTGCCTTGATGCGAAGGTGGCAAAGAAGTACATTGATCATT GGTTTATTTTGAGGTTGCTTGAGTTGTTCGATGCAGAGGATCCTAGGGAAAAGGACTGTTTGAAGACAATCCTGCATAGACTTTATGGGAAATTCATGGT GCATAGACCCTTCATTCGGAAATCGATTAACAATATATTTTATAGGTTTGTGTTTGAAACCGAGAAACACAATGGGGTTGCTGAGTTGTTGGAGATTTCT GGGAGCATAATCAGTGGATTTGCTTTGCCATTGAAAGAGGAACACAAGATGTTCTTATGGAGGGTTTTGATCCCCTTGCACAAGCCGAAGTCTATGGGGG TCTACTTCCAGCAATTGACATACTGTGTTACACAGTTCATAGAGAAGGAGCCGAAGTTGGCGAGCACTGTGATAATGGGTTTGTTAAAATATTGGCCAAT TACAAATAGTCAGAAAGAGGTCATGTTCCTAGGTGAACTTGAAGAAATTTTGGATGCAATTAACATGGTAGAGTTCCAGATGGTCATGGTCCCATTGTTT TGGCGGATTGGATACTGCATTAACAGCTTGCACTTTCAGGTTTGTAGCAATACATTATTCAGCAAAGGTCCCCTTATAGTCAGTTAGTCACTATGGAGGA ATTCAATCATCTGTGATTCTGAGATGTGACTCGTTCATCTGTCTCAGTTTCTTTGGGTTGCTAAGAGCGGTCCATCCACACCGGGGGCACTGAAAGTGAA GGCATTCCCCTCTCAAGTCTTAACATCCTGGCTTTTAAGAGTGGCTTCTCCTCGACATCAACTGGTATTGGAGCTTCGGTCGTCTCTCCCCAATGTAGAT GGATGCTCTTTCCAACCCAATGAGATTGATGGAGGAGCGTGAATCCTGTACAGGACGGTTTTGAGACAGAACACTGATTTAAGTGGAGGCTTTCCTCTGC ATCATTGAGACTAGTGTTGCTTTTCTTCAAGTTCAAAGTCAACGGATCTTGCAACTTTTGTTGGGAGATTCATCTGTTTAGGTGTTTCATTCCGGATTGT ACTAATTTTGGGTCACTAGTCACTGATACCATGTGAAAGTACTTTATCTATGATTTCTTGTTTCTTTAGAGCTCTCGGTATTTTCCTGAAGCGTATTTCC AAAATCCTTGAACCCTCAGCTTCCTTATTTGAATTAATGATTTTCTAATTGGTGCAATTTTTCTCTATCTCTATTCATTTGAGAATCCGTTGTTGATTAT AACAGGTAGCTGAAAGAGCTCTTTTCTTATGGAACAACGACCACATTGTTAATTTGATTGATCACAATCGTCAGGTGATCCTGCCGATCATATTTCCAGC TTTAGATAGGAATTCTCAAAGCCACTGGAATCAAGCAGTGCTCAACTTAACTCATAATATAAGAAAGATGTTCATGGAGATGGATGCGAATTTATACCTG TCATGTCATTCTCACTTTAAGGAAGAAGAAGCAATGTCAAGCACGGCAAATGAGAAGCAAAAGGAAGCGTGGAAACAACTAGAGCGTGTAGCCAGTCTCG GGCCTGTAATCGGAAATACAGCAGTTTTAGTCTCTCCAATTTGATAGCCTGTTATGCATGAATCCACACTACATTACTACATCCCCAGTCTATATCTCTA TCCTCCTGTTCTAGTAGAAAACCTCAAGAAATGTCGTAATGGCTGTTATTGGCAGCGACTTTTTTCCGGGTCCCTTAAGGTTTTGATGGTTCTTGTAGCT CAAGATGTTGTAACTTGTAACATGGTTTTGATTACCAATGCATAGGAACAACTCTCATTCTGAGAAGTAATGAGAAAGACCATGAAGTGGATCAAATGAT TATTTGTATAAGCTCATTTCCAAAATCTTCTGTGTTATGACTAAGTATGTTTTTTCCTGCAAAAGTAGTTGAAAGCTTATGTAGCTTAAAGTTTATGGTT ATATTGGTAGCTTATTGAATAAGCTAGTTAACAAAGTTGTTAATTATTT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_33852; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_128626
| Blastp | Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform from Arabidopsis with 73.15% of identity |
|---|---|
| Blastx | Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform from Arabidopsis with 70.73% of identity |
| Eggnog | Protein phosphatase 2, regulatory subunit B(ENOG410XQJW) |
| Kegg | Link to kegg annotations (AT5G25510) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019416506.1) |
| Pfam | Protein phosphatase 2A regulatory B subunit (B56 family) (PF01603.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |