| Id Trinity | FTRINITY_DN53473_c12_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_128176 |
| Sequence | AAGAGAAGAGAGAAGAGAAGAGAGAAGAGAAGAGAGAAGAGAAGAGAGAAGAGAAGAGAAGAGAGGAGAGGAGAGGAGAGAAGAGAGGAGAGGAGAGGAG AGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAGAAGAGAGACGATGGAGAGTCTGAAAGCTTCGATTCCAGAAGGCCTCAAACAAATGATATCA GATAGCACCGTCGATAATCTTTCCACAACTTCTTCATATCTCCACCGTTTTTTCCTTCGTTTCAATCCTTTTCACCACATGATTACTGAATTGGCGGACC CAAGCTATGGTTTATGTGGTAAGAGTAAGCACGATGCTTTGGAATCTAAGCAGCTTGGTAATCAGTGTTTTTTAGACAAAGATTATCTCCAGGCTTTGAA TTTCTATACTCAGGCATTGCGCAGGGCTCCTTTTGAAGATGGCGACATGGAAAATAATCTGGTTGCCACATTGTATGTCAATCGAGCTACTGTATTGCAT AAAATGAGTCTTTTGGTGGAGTGTTTGCGAGATTGCACTCGAGCTCTCCAGATATGTCCAAGCCATGCAAAGGCATGGTATAGGAGAAGTCAGGCAAATG CTTCATTGGGAAATTATAAAGACGCTATTTTTGACCTAAATGTGGCTAAAAGTATGGAATCATCAATGGGTGGGAAGAGGAAAATTGAAAGTGAACTGAA AAGTATTTTAGACCAATGCAAGAGCACAAGTATGGCAGTAAAGCACAGTGGGAACTGCCTGAATACAGTGGATGAGATGCCCCAAATAAAGCTGAAGTCT GTCACGATTCCTGATAAAGGTAGAGGCATGGTATCATCGTGTGACATCTCACCAGGTTCTTTGGTTCATACTGAAGAACCTTCTGCTATGATCATATCAA AGCAATGCCGGGAAACTCATTGTCATTATTGCTTGAATGACCTACCACCTGATAGAGTTCCTTGTATATCGTGTTCAATACCACTGTATTGCTCCCAGCA ATGCCAGATAAAGGCAGGCGGGAGAATGTTCAGGATTTATCCAGAAGTTCATGCCATTCTTAAAAGTTTACCCAGAGATCTTGGAGAATATGCTGCAGAA GTTATTCAAGTCAATGATTCTGAACAAGAAATTGAGAATATTTCTGAACATAAACATGAATGTCAAGGTGTAAATTGGTCTGCAGTACTGCCATCTGAAA TAGTTTTGGCTGGCCGGATACTAGCAAGGCTTTTGCCAAAGAGCACATCTGAAGATATTAAAGACTTTGTAGAAGGGCTGGAGCTTTCTCATTGTTATAA ACATATGCCACCTGAAAGCAAATTGGACTCACATATACATGCCATTGTATTGTTGCACTGTCTTCAACACTCTAATAGCATTGTGTTTCCCATAGACGGA GTGTCTTTGTCACAGGTTGTCATAATTATTTCCCAAATTAAAGTGAATTGTATGACTGTTGTTCGTTTAAAGTCAATAGATGCTCATGTGCGATCAGACC AGTTTGGAGAATTTCCATCTAATGCATATTTAACTAGTAATGTGGAACAGGTTAGAGTGGGAAAAGCTATTTATAAAACTGGCAGTTTATTCAACCATTC TTGCCAACCAAATGTTCATGCATATTTTCTTTCACGTACTCTATGTATACGAACAACAAAATTTGTAGCAGCCGGGTGTGAGCTGGAGTTGTCTTATGGT CCACAGAATGTCTGTGACCAAGCATCTGAAAAACTTAAGCTGTTAAGAGAATATTCTTATCATTATCTCAAACATGCCTCCTCACAAGAATGCTCTTTGG TTTTGAGGCATGGACAAAGCACAGGTTGGGCTGTTGGTTTGTAAAGATCGCCTTGACTTGCTCAAAGATGAGTATGCCTTTCAGTGTCAGTGTACTGGTT GTTCAGAAGCCAATCTGTCTGACATTGTCCTTAATGCTTTCCATTGTGTCAATCCAAACTGTTCTGGCGCAGTGTTGGATAGCAGAGTCGTTGACTGTGA AAAGCAGAAAATCAAGCGCTTCCCTATTGCTGATGAAGCAGACAAGAACAGTGACATTTTTGAAGTGTGTATTCGTGCATTCAGCCAAAATGATGCCTCC ATTCCTATCCGACCTGGATACTGCTTGAAATGTGGTTCTTGCTGCGATTTGGAGTCTTCATATGCTGCAGTTTATAAAGCTTTAATATGCATAAAGAGGT TGCAGGATGCAATTCTGTCGAAAGAGATTTCAAATACTACTATTACAGAAGCTTCAAAATTTCTTCATTTACTGAGATCAAATTTGCATGCATACAACAA GCTTATTGCCGAGGTAGAGGACAACCTTGCCCAGGCTTTTTGTTTATTGGGAGAATTAGAGCTGTGTATGGACCATTGTAAAGCATCAATCCAGATTCTG GAAAAGCTATATGATCCTGATGATATTGTTATTGCTTATGAACTTGTGAAGCTTTCTTCCATCCAACTTTCCTTGGGTGATGCTACTGCTGTGGACAGCA TAAACAGAATAGGTGATATCTTCTCACGTTATTATGGATTTCATGCAGAATTGGTCTTCCCATATCTTAGATACCTTAAGGGAGAAATTGAAAAAAATTC AGTTGAGAGTGGCTAATTGCTACTCAACAACCAATTGCTTAAGCATAGGGTGCTATGAAATGTGAACAGATTAAATGTCAGAACATTTGATGTGGAAGGT AACTCAAAGTTTGTCTATGCAATTTTGCAGTCAATACTTTTTGTGCACAGATAATATATGGAGGCTTTGAATACCTATACTCAAGTGTGTTTTCTCTTTT GAACTGAGAAAATTTGTTTATATTGATATATTCAAATTGAAAGGGGAGAAGATATATTTAAAGAATGTTGAAAAAATCTTAGTGGCTTGAACTTAATCCT AAATTAGTGAGAGAGGTACCACTAATTACTTTTCTTATGATACCTTTCATTATCATGATGTGATGTTATCAGCACTAATGCATATAATTATATCAGAAAT CTGTG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_33969; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_128176
| Blastp | DnaJ homolog subfamily C member 7 homolog from Dictyostelium with 32.19% of identity |
|---|---|
| Blastx | DnaJ homolog subfamily C member 7 homolog from Dictyostelium with 32.19% of identity |
| Eggnog | ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484) |
| Kegg | Link to kegg annotations (DDB_G0288639) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019437284.1) |
| Pfam | SET domain (PF00856.27) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |