| Id Trinity | FTRINITY_DN53476_c1_g1_i12 |
|---|---|
| Name Transcript | Ll_transcript_129283 |
| Sequence | AAGGTTGATTCAAGTTTCATAAGATAAGGTTGTGTTCTAACACAACCATGGCTGTAGCTTCAAGATTCATGTGTACAACTCTTACTCATCACGGTTTTAG CTCAACAACACATAGAACCCATTTGGGTCATGCTCAGTTAACTCTTTCTTCACGCAAGAATCAAATTATTCATTGTTCAGTTTCTGCAAGTGATGCCACA AAAACCTCCTCAGTGATGGAACCCGTTATTCCATGGGGCTGTGATATTGATTCAGTAGAAATTGCATCAGCTTTGCAGAAATGGTTGTCAGAGTCAGGCC TTCCACCACAGAAGATGGGAATACAAAGAGTTGATGTTGGAGAGAGAGGACTTGTTGCATTGAAGAATATAAGGAAAAGGGAAAAGCTTCTCTTTGTTCC TCCCTCACTAGTCATAACTGCAGATTCTGTAAGCTTTTCTTTATGTTAGTGTTAATTAAAGTCCCTTGTCTGATTGAACTTCTAAGTTGTATTTACCGCC ACTGAGGCAGTTGTGTTGTAGCCCGATACTGTCGCATCATTATGATCTAGTGTCACACTAAAATTTTGGTCTATAATTTGAAAAAAATGGTTGTATCTGC AAGCAAATTTAGTAAGAGTTGCATATAAAGAGCTGGGAGAGAGAAAGATTTGTGTTGATTATTGGACTCATAATTCCATAAATGATATAAATTTATTCAA TAACTTAAGCATTTAATCTTACATAAAGTAGCATTATTGGAGGGGAATCTGCTTATAAGTTATTGCAAAATGGTTAGCAGAAGAGAATTCAAAAAACACT TGTACTCAACTCTACTGAGTTGCAAATGCTCAGTGTTTTAAATTGCAGTTGCGATTGCGATTGCGTTAACGGTTCTGTTTGCTGCGATTAAGGTCATTGT GGTTGTTGTAATGCGGATTGTGGCTGTTGCAGTGTGAATTATTTTGTAATTAAAAAACTACTTTCGAATTCGATCCGACCTGATGTGGTCCAAATGCGGT CTGATGCTGTCATTGTGATTCGGAATCACACCGCAATTGCGGTGTGATGCAGTTGTGGCGGTCACTGCAACCACAATATTACGGCCGCAATTTAAATCAC TGACATGCTCTTACTATATTTCAAACAAATATAAAGTAGAGCATTATATAAGGACGTGGCTGTCAACACCAGTACTTGATTTGATCCAAGAAAGTTTCCC TGTGAATTGGTCTGCATAAGAAGTTAGAATGCTACTCATAATTTAGGTCTTAAATTGTAAAGCACATACTATCTGTGTCAATAGCTTCTTTCCTAAAACT ATATGCGATGCCATATGAAGAAGCAGAACAATCATGGTTGAGTAAGTATCTTCTTTCCTAAAATTATATGTGATGCCATATGAAGAAGCAGAACAATAAT GGTTGAGTCGAATGATCTGTTATTTTGGTTTCCGCTTTCTGGTGTTCGGTGAGATGAAATTTTTTTATTGATATATGGAAACTTTTTTTAAAGTTATACT AAAACACCCGAGTTGGTTCATCATATTGATCTGGGTCAGGTACTTATGCATCTGTATGGGTTATGTCTCTGTATTATGATTGTTAGGAGTGGAGTTGTCC AGAAGCCGGTGAAGTATTGAAAAGGAATTCAGTGCCCGATTGGCCATTCATTGCAACTTACCTCATAAGTGAAGCTAGCCGCATGAAATCTTCTAGATGG AGCAATTATATATCAGCCTTACCTCGGCAACCTTACTCACTTCTTTACTGGTCACAAGCAGAACTAGATCGCTACTTGGAAGCTTCACAGATTAGAGAGA GAGCAATTGAAAGGATTAACAATGTGATTGGAACATACAATGATTTGAGGCTGAGAATATTTTCCAAATACCCTGATTTATTCCCTGAAGAGGTGTTCAA CATAGACTCCTTCATATGGTCATTTGGCATTCTTTTTTCTCGCATGGTTCGGTTACCCTCCATGGATGGAAAAGTTGCCTTGGTTCCTTGGGCAGATATG CTGAATCATAGTTGTGATGTGGGGACATATTTGGATTATGATAAATCGTCGAAGGGGATTGTTTTTACGACAGATCGAGTCTATCAACCAGGTGAGCAGG TGTTTATTTCATATGGAAAAAAATCAAATGGAGAGCTTCTGTTATCTTATGGATTTGTTCCAAGGGAAGGTGCTAATCCTAGTGATTCAGTTGAGTTGCC ACTGTCACTCGAGAAATCTGATGAGTCCTATGAGCAGAAGTCAGAACTCTTGAAGAAGTATGGTTTATCAGAATCTCAGTGTTTTCCTATACAGATTACT GGTTGGCCAGTGGAGTTGATGGCTTATGCTTATTTAGCTGTTAGTCCTTCAAGCTTGAGTGGGAAATTTGAAGAGATGGCTGCTGCAGCATCAAATAAAA TTACAAACAAGAAGGATTTGCGATATCCTGAAATAGAGGAGCAAGCATTACAATTCATACTTGATAGCTGTGAATTCAGTATATCAAAATACAACAAGTT CTTGCAGGTAAGTGGATCACTGGATTTGGATGTGACTTCTCCAAAACAGCTCAACAGAAGACTCTTTCTGAAACAGCTAGCTGTGGATTTGAGTACTAGC GAGCGAAGGATATTGTTTCGTACTCAATATATATTGCGAAGGAGGCTGAGGGATATGAGATCTGGCGAATTAAGAGCTCTAAAAATCTTCGATGGGTTTC GGAATCTTTTCCAATGAGGGCATTCGCTAGTGCATTATTGTTCAATTCATACATGTTGGGATTCATTTGTTGGTCAAGTTTTAAGTGATGAAATATTACA ATCCATTTTGAATAAAGCAAGAGGGGGAAAATGAATGACTGCAATAGCAGTTTTGCTTGATCCAAACTACTTATTTTCTTTTCCTTTGATGTTTAAACTG TCAAGGTGAAAATTCTATAATCTTATGAAAATAGGCATTGTAGTGTCCTGTGCTAGGATAAGGGCCATGACCCTTGTGAGATTTTTTCTTTTTGGGTCTG TCTTCATATTCCATGATCAAGTAAGAAAACTTGCATGAGTTTTTAAATATCTGAAAAATCACATATCATGCACTAGTTTTCTGCAACAACCTGATTACAC TGTCAAATAAAGCTATAAAAAAGTCTCTCAATCTCCAATGAAATGTGATATGATTTACCAACTTTGTTTTCAAGGTAAATAATGGAAGGGCAATGCACAT TTTCACCTACTTAGGAAACCAGTAAGAAGTGGCAAAAAGTATCAGAAAAGTGACT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_33987; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_129283
| Blastp | Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic from Nicotiana with 27.02% of identity |
|---|---|
| Blastx | Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic from Nicotiana with 27.14% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (AAC49566) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019420730.1) |
| Pfam | SET domain (PF00856.27) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |