Id Trinity | FTRINITY_DN53476_c1_g1_i3 |
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Name Transcript | Ll_transcript_129274 |
Sequence | AAGGTTGATTCAAGTTTCATAAGATAAGGTTGTGTTCTAACACAACCATGGCTGTAGCTTCAAGATTCATGTGTACAACTCTTACTCATCACGGTTTTAG CTCAACAACACATAGAACCCATTTGGGTCATGCTCAGTTAACTCTTTCTTCACGCAAGAATCAAATTATTCATTGTTCAGTTTCTGCAAGTGATGCCACA AAAACCTCCTCAGTGATGGAACCCGTTATTCCATGGGGCTGTGATATTGATTCAGTAGAAATTGCATCAGCTTTGCAGAAATGGTTGTCAGAGTCAGGCC TTCCACCACAGAAGATGGGAATACAAAGAGTTGATGTTGGAGAGAGAGGACTTGTTGCATTGAAGAATATAAGGAAAAGGGAAAAGCTTCTCTTTGTTCC TCCCTCACTAGTCATAACTGCAGATTCTGAGTGGAGTTGTCCAGAAGCCGGTGAAGTATTGAAAAGGAATTCAGTGCCCGATTGGCCATTCATTGCAACT TACCTCATAAGTGAAGCTAGCCGCATGAAATCTTCTAGATGGAGCAATTATATATCAGCCTTACCTCGGCAACCTTACTCACTTCTTTACTGGTCACAAG CAGAACTAGATCGCTACTTGGAAGCTTCACAGATTAGAGAGAGAGCAATTGAAAGGATTAACAATGTGATTGGAACATACAATGATTTGAGGCTGAGAAT ATTTTCCAAATACCCTGATTTATTCCCTGAAGAGGTGTTCAACATAGACTCCTTCATATGGTCATTTGGCATTCTTTTTTCTCGCATGGTTCGGTTACCC TCCATGGATGGAAAAGTTGCCTTGGTTCCTTGGGCAGATATGCTGAATCATAGTTGTGATGTGGGGACATATTTGGATTATGATAAATCGTCGAAGGGGA TTGTTTTTACGACAGATCGAGTCTATCAACCAGGTGAGCAGGTGTTTATTTCATATGGAAAAAAATCAAATGGAGAGCTTCTGTTATCTTATGGATTTGT TCCAAGGGAAGGTGCTAATCCTAGTGATTCAGTTGAGTTGCCACTGTCACTCGAGAAATCTGATGAGTCCTATGAGCAGAAGTCAGAACTCTTGAAGAAG TATGGTTTATCAGAATCTCAGTGTTTTCCTATACAGATTACTGGTTGGCCAGTGGAGTTGATGGCTTATGCTTATTTAGCTGTTAGTCCTTCAAGCTTGA GTGGGAAATTTGAAGAGATGGCTGCTGCAGCATCAAATAAAATTACAAACAAGAAGGATTTGCGATATCCTGAAATAGAGGAGCAAGCATTACAATTCAT ACTTGATAGCTGTGAATTCAGTATATCAAAATACAACAAGTTCTTGCAGGTAAGTGGATCACTGGATTTGGATGTGACTTCTCCAAAACAGCTCAACAGA AGACTCTTTCTGAAACAGCTAGCTGTGGATTTGAGTACTAGCGAGCGAAGGATATTGTTTCGTACTCAATATATATTGCGAAGGAGGCTGAGGGATATGA GATCTGGCGAATTAAGAGCTCTAAAAATCTTCGATGGGTTTCGGAATCTTTTCCAATGAGGGCATTCGCTAGTGCATTATTGTTCAATTCATACATGTTG GGATTCATTTGTTGGTCAAGTTTTAAGTGATGAAATATTACAATCCATTTTGAATAAAGCAAGAGGGGGAAAATGAATGACTGCAATAGCAGTTTTGCTT GATCCAAACTACTTATTTTCTTTTCCTTTGATGTTTAAACTGTCAAGGTGAAAATTCTATAATCTTATGAAAATAGGCATTGTAGTGTCCTGTGCTAGGA TAAGGGCCATGACCCTTGTGAGATTTTTTCTTTTTGGGTCTGTCTTCATATTCCATGATCAAGTAAGAAAACTTGCATGAGTTTTTAAATATCTGAAAAA TCACATATCATGCACTAGTTTTCTGCAACAACCTGATTACACTGTCAAATAAAGCTATAAAAAAGTCTCTCAATCTCCAATGAAATGTGATATGATTTAC CAACTTTGTTTTCAAGGTAAATAATGGAAGGGCAATGCACATTTTCACCTACTTAGGAAACCAGTAAGAAGTGGCAAAAAGTATCAGAAAAGTGACT BLAST |
Tissue | flowers |
Gene name | LI_gene_33987; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_129274
Blastp | Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic from Pisum with 28.48% of identity |
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Blastx | Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic from Nicotiana with 27.7% of identity |
Eggnog | - |
Kegg | Link to kegg annotations (AAA69903) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019420730.1) |
Pfam | SET domain (PF00856.27) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |