Id Trinity | FTRINITY_DN53481_c1_g2_i1 |
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Name Transcript | Ll_transcript_128707 |
Sequence | TTCTAGTCATAGCTTCTATAATTGTTGTTAATGTGCTATGCTTTTGTTAACATTGCTTTCTTCTTATGATTCCGAATTTGGGATTCAATTTTATGTTTGG TCATGGTTGTTAAGTCATGCCATTCTTCTCCCATCTTGCAGTATTCAACCCAAGGCAAAGAGAAGAGGTGGCCCAGGTGGTCTCAACAAACTCTGTGGTG TTTCGCCTGAACTTCAGGTCATTGTTGGCCACCCAGCATTGCCCAGGACCGAGGTTTCTACTCATTTTCTCTTTAGACTGGGTCACCTCTCCCGTTATTG TGAAGCAACTGTGGGCTTACATAAGGAAAAACAATCTCCAAGATCCTAGCAACAAAAGGAAAATAATTTGCAATGATGAGCTGCGTGTGGTATTCGAGAC GGATTGCACTGACATGTTCAAGATGAATAAGTTGCTAGCTAAACACATAATCACCCTTGAACCAACCAAACAGCCAGTTCCTAAGAAGCAGAAGGTAGAG GCGGAGTCTGGAACAATAAGTGCTCAACCTGCTCCTTTGGTAATAATATCTGATGCACTTGCTAACTTTTTTGGCATTGCTGGAAGGGAGATGCTACAGT CAGAGGTTCTAAGGCGTATCTGGGAGTACATAAAGGTTAAGCAACTAGAGGATCCTGTGAATCCTATGACAATAGTATGTGATGCAAAGCTTCAGGAGCT CTTTGGCTGTGAAAGCATTTCAGCATTAGGTATACCTGAAGTTTTGGGCCGTCATCATATTATTAGGAGATCATGATGCTGACAACATTCTCTGTTGGAG CTGATCTTGGCCTCATGTTGATATGGTTCTGTAATTTGACTGGTTAGATGTGTGTTCTTAGTTCATGTGGATAAGTTATTAGCAGAATGAAGATGTAATA GGGACCAGCTTTATGTTGAGTTTGACACTCTGTTTCTAGATCTTTTGGTTCTGGTTTGTCTAACTTGGCACTTAGTTTAGGATGACCTATGGTATTCTGA CAGTAGGAAAGAAAATGATGTACAAGATATCTTCCTTCAAAAGTGACTCATGATATTTATGTGTAGTTAATGAAATGTAGGTTGCCAAATGTAAATGTAA GATTTTTAACTTGAGTACTAAATTACTAATTAACCATCCGAGGGGCTAAAATGCAGTTCTTGACTTTATTACAGAACCACACTGTTTCTGTGCTCCACCT CCAC BLAST |
Tissue | flowers |
Gene name | LI_gene_34038; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_128707
Blastp | Upstream activation factor subunit spp27 from Schizosaccharomyces with 40.45% of identity |
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Blastx | Upstream activation factor subunit spp27 from Schizosaccharomyces with 45.31% of identity |
Eggnog | - |
Kegg | Link to kegg annotations (SPCC285.17) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019426199.1) |
Pfam | SWIB/MDM2 domain (PF02201.17) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |