| Id Trinity | FTRINITY_DN53517_c2_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_180420 |
| Sequence | CACAAGTTGAACTAAGGATACCCATTAACTACTTGTACTCTTTCATAATCAGAGAGATTCAGAAATGGCTTCATGGAATTCATTTCCATTAGAAGTAACT TATCAAGTGTTGGGTTGGCTAGCTTTTCTTTCATGGGCCATATGTGGCTACCCTCAAATTATCTTGAATTTTCATAGAAAAAGTGTGGTGGGCTTAAACT TAGATTATGAGATTCTCAACATGGTGAAGCTTTGGTCATATCTCATATACAATGTTTCCCTCTTCTTTAGCTCTGATATTCAGAAGCAGTATTTTGACAA GTATGGTTATGGACAGGTATTGGTACCAGTTCACCAGTTTACCAGTTGAACCGGACGACATGAACCGGTTTTTACAATGCCAATAAGTTCTCAAAGGTTA CTTATCAATAAGTCAAAATAGGAGGTTGTAGATAAAAACAAAGTATTATATATGCATGAAAATTGAATGTAATGCCTAGAAATATTGAAAATGAACAATG TCTCTTAATCCTAAACCATTAAATATTCACATTATCTACATAATCTCTTGTTATTATAGATGATTCCTGTAGCTGCTAATGATGTTGCTTTCTCAACTCA TGCTGTTATACTGAATTTAATTATACTATCACAAATTGCAATCTATGAGGTAAAGTAGTTTCATATTTAAGAGATTTATTTTTCCTCTTATATAACCATA ATTCTAACATTGTTAATGTCTTGTGATTGTTGTTTATGGTTTTTGCAGTGTGGAACTCAGAAATTCTCCAAATTTGCTATAACAATAGTAGCAGTTGTGT TGTTCAGTGCTGCAGTTTGTTTTTTCATAGCATTACCAAGCCATTCATGGCTTTGGTTAATCTCCATTTTCAATACTATTCAAGTATGTTTGACCATCAT CAAATATTTTCCACAGGTCAGAATGTCTTAACCTCCACATTATGATCATCTGAAACTTTGACCAGAGATATTACATTGAGTTTGTCTTATATGTTATATT GAGTTTGTTATATCATCCAATATAGGACCTCTAACATTGTCACCCCTTTAATTACCGATAACCATGATGACTTTAACTCAATCGATACTGACCTAATGAT AGCCCTTTTTCTTTTGGTTGTTTCACTCACTTATCAATATTCGGTAACATAGCAACGGACGTTGGTTCAAGTGGTACATGCTTGATTCCCCTTAAGGAAG GTATCGGGTTCGATCCTTGTGGATGAAAAAAATGTCCGCGGGGAGAGTTAGCTCCACTTACCTGTGGATATTCCTGGCTCGGGCAAGATTGCCTCAAGTG CAAGGATACAGGTGGGAAACCAAAAAAACATACCTTAATGCAGCCATAGGTAGCCTTTTTCATAGCACAACTTCCAATAAAAGTAACAATTGTTATTAGG ACTTAAGCACAGAACTCAAACCAAAAGACTAGTTTATTAGGTGGAAAAGCCACATATCTTATGTACCTTATTGATTTTGCTATGCTACCAAATATGTGAC TCCTAACTTCAAGATATATTTCTCTTCCTTGATATGTGATAGAAATACAAAATTATGGATATTCTGTTAAGAAATGCAGGCACTCATGAACTTCATGAGA AAGAGCACTGATGGATTTAGCATTGGCAGTATTCTCCTTGATTTTTCTGGAGGGATCTTCAATTTTTCACAAATGGTTGTGCAATCCATTGATCAAGGTT CATGGATGAACTTCTGTGGGAACATTGGAAAAGTAATGATATCCTTGGTAACTATATTCTATGATTCTATTTTAATGTTTCAACATTATGTGCTATATCC TGACAACAAAGGGGTTATTACTTCTAAAATATATGAAGAAATCAAGCAACCACTAAACAGTGCAACTCAAATAGATGAACAAATCAATGGTTCAGTTAAA TCTTCTGATCTCTCTTCAGCAGAAGTTTGAGGTATAAACTGGATCATGTAGTGTATATAATACACATAATATACAAACTCCTTAGATTAAGCTTTTTAAG GATAATAATGTAAAAAAGAATGTTATTTAAACACTAGTGATAAATACTCCAAGGATACTTCAATTCCATTGGCATGAATGTACATTTATTCAGTTTTACA TACTATGTATAGTAAACAGTAAATAAT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_34418; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_180420
| Blastp | Cystinosin homolog from Arabidopsis with 60.22% of identity |
|---|---|
| Blastx | Cystinosin homolog from Arabidopsis with 57.14% of identity |
| Eggnog | cystinosin(ENOG410XQSD) |
| Kegg | Link to kegg annotations (AT5G40670) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019427034.1) |
| Pfam | PQ loop repeat (PF04193.13) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |