| Id Trinity | FTRINITY_DN53519_c0_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_182453 |
| Sequence | GAGCTATTTCCCTCCAAAATGTCGAATCCAAGAATTCCCTTAGTCATTTCATTCGCATGTCACTCTCCAAATTGATCATTTCAGTGTTTTCGGAACTTTT CCTTCTTTTCTTCTCCGTTAGTATTATCTATCAGATTCTGATCACTATCACTGTTAGGGTTTCACTTCAAACAAAATCAGTTAACCTATAAAACGAACTT CACTTTCATATTCCAATGATTGAAGAAGCATTCTACTCATTTCGTTCTCTCTCTCATTCTCAACCTCCTTCACCACATGGAGGTGGAAATAAAGGTGCAA ATGAAGATGAGCAGTTTCAAGAAACCGAGCTTTTCGAGGACACGCTAGTGATTAATAATAGTCCCTTTACTGAAAATCTCAACCTGAACACTGAGCTTGT GGAGGATTCAGACCCTGAAGAGAACATGACAAGTGGTGCAATATGTGAGTATGAACAAGAAGTAGTTCTTGATAGTGAGGATGAAGAAATGGAAAATGGT GAAGTAGTAACTGTTGCCAAAGGATTAATTGAGGATGAAAGTAGTCCAGCATTAAGAAGTCCTTTGATGCGTTTCCAAAAGAGACAGCCGAAGCCATCTC TTGGGAAAGTAGTCTCAAATGACATCACTCCCGAGAAATCTGCTACAGGGGACAAAGAAGTTCTGACTGGTGCTGACAGATTTTATGACAACGATCATCT GTATCTACCTGCAAGGTTAAATCACATTCACTCATCCAGTCCCGGGGATTCAACCCAAGATGCTCTTGGCTTTGTGGATCGGTACTTATCTTCTAACAGC GTGGATTTATTCCAAGGAGTTCAGCATAGAAAGGGAACTCGAGTTAAATCACCTTATGTCCCAAGTGCAAGAGGATCTCTAAGTTTGGCCAAGAAAATTA AAGTTCGAACTCTAAAAGAGGAAATTGAACCCTACGAATTGGTTGAAAGTGATCAGAATGACAAAGGAGCTGGTATCTTTTATAAAAATATTGAAGCATC TTCAAACTTTAAAAGCTACAGAGAGACATATACGAGAAGACAGAAAAAAGGTGCCCATCTTCAGAATCAAGGGAACTGTAGTATAAGTAATGGATGTGAA GAGAAGTCAGTGCAAGGACCAGGAATGATAACAGAAAATAATAACCCTGTCAAGGAGTTAGATATTCAGTCAAGTGCAACAAGAGAGAATGTTGATGCGT ATTCCAGTGTAACAAATACAGAAGACATGCCTGATATTGGTTTAGACACTCAAATAGCCGCCGAAGCTATGGAGGCCTTAGCCTATCTATCCCCTTCTGG TAGTCATTTTAATGATGCCCATCAACCAGCAAATGCACTTGATAGCTCTTTGACTGATTTGACGGAGAATGAATCTCATCTGGGAATTTCTGCAAACAGA CAGAAACCTGGTTTACAGTCTATCGCAATAAAATCAAACAAAAGAGATGTCTCTTCCTGTAGCTTTAGTACAGTAACTTCTTCCTCTTGCAAGAACACTG ACAATCAGGATCCAAACCTTGCCTCCGGGAAAATGAAAAGGATAATGGAAAGCAAGTCAAATATTGAGGGACACTTTGACAATAATACCAGTTCTCCAAT ATCCTGTGAAAATGTCTCATTCGAACAGGGTTGCTCACCAGGAGAGTATAAGAACTTCCAATGTGTTGCCAAGGAACAGAAAAATTGGAATAACGAGAGC AGATGGACAAGGATCAAAGATCAACCAAGCCATCATACAGGGAGGAACAATACTGTCAAGGAGGAAAACATGATTACACACAAGAGGAAGGAGAATGGTC TGGTCAATGACTCATTGACATTGGATGTTAGGACAAAATATCTGAAATTGCCTTCCAATTCATGTGGGGTGAGTAGAAAGAGCAGGTTGAATGATCAGGT TCAAACTAGTCCACAGCTATCTGCATGTAGCAGTCTTTTAAGGATTGATTCTTGGCTTTACCCAAAAAGACCAAGAGGAAAAAGAAAGCGGGTTAATGTA CATACCAATCTTGATGCACCTACAATTTTGTGTATTGATGGAAAAGAAAATGTCCTTTCCACTCGCAATCTAGAAGGCCAAGATGATGTCGATGAATCAT GCTTACCTCCCAGCCATCCACTTCTCAAAATTTCAAGTATTGCAAATGGCGAATGCTTGTTACAGTGGAGTTCTGTTCAACCAGGTTTACCTGGTGATGC CATGACATTTCAAAACATGCATGACAAGCATCCCTTATTGCTGGCACATGTTGAAATATCATCGAACAAGAGCATTGCAAAACAGAGTCTGAAAAAAAAT CCAGCTCTAGACACTTCAACTGAAGGAGTAAATATGTCAAATGCTAACCAAACATATAACGAGCATAAAAAAAAGCTGTGCAACAAAAACTTGCCAAAGT CACCCCTTTTCAAGGAGCTTAACAGATTAGGAGTATCTGAGTTCAGACAAGATCTGACATGGAAAGATCTGAGACAGCGAAGAGATATGACATATGTCCG AGTTCTGTTTAGCCAGCATTTGGATGACAGTGTCATCAAGCAGCAGAAAAAGATCTTGGCACGGTTCAACATTTCTATTGCATCTAGCTTAATGGAGGCC ACACATTTCGTAGCAGACAAATTTACTCGTACAAGGAATATGTTGGAAACAATGGCTCTTGGTAAATTTGTGGTGACTCACTTGTGGCTTGAGAGCTGTG GGCAAGCCAACTCCTTTATTGATGAGAAAAATTACATTCTGAGGGATGTACAAAAAGAAAAGGAAATAGGCTTTAGCATGCCCGTTTCTCTCATTCGAGC AAGAGAGAAGCCACTCCTGAAGGGTAAACAAGTCTACATCACGCCACATGTTAAACCTGACAAGGAAGTCCTCACAAGCTTGGTCACAACTGTTCATGGC CAGGTAGTGGATGATAGTCAGATATGTCCAGACAAGAATGATAAGATCTCAGATGATCTATTGATCCTTTCTTGTGAAGACGACTATGCAATTTGCCACC ATTTCCTTAATAACGGAACTGCTGTTTACAGTTCAGAGCTTCTTCTGAATGGAATTGTAATCCAGAAGTTGGAACTTGAGAGACATCAACTCTTCATGAA TCATGTTACAAGGAATAAACCAGGTACGTTTAATCGGTTCGGGAAGGTTTACAAAAGGCGTTTGAGACCTGAATCTGGACCGTAGCTGATTTCTGGACAA CACTATTCATTATAATTCAAGGTTGATCTCCAAAAACTAGTGGGTACTCGTCTCAGATGCTGGTGTACTAGCGCAACTCGAGCATTTCTTAAATGTGCTA CTTAGTTTTGTTTTTTGTGTGTGAATATTTGCTTGAAGAGAATCAAAGTGATGGCAAAGGATTGCAGTGATAGCTACAGGGTAGGGAATGGTTTTAAATG CAGCTTAAATTGATTAAGATAACTAGTATAAAGATTCTATAAACGTGGTTCATATACACAAAATGTATGTATTTTGTTTTCCTTGCTGAATGTAGAAAAG GACTACCAGCTACATCATTTTGTACACTGCAAATAGACTAACTGGTGAAGTTCTTTTTCTCACTGAAAATGTATGCTGGAACATGGCTACCCAATTTTCC AGAGCTTTTTGAATTATATAAGGTTACCAGTTTAAAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_34424; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_182453
| Blastp | PAX-interacting protein 1 from Bos with 32.34% of identity |
|---|---|
| Blastx | PAX-interacting protein 1 from Bos with 32.34% of identity |
| Eggnog | pax interacting (with transcription-activation domain) protein 1(ENOG410XSGS) |
| Kegg | Link to kegg annotations (513213) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019418017.1) |
| Pfam | Regulator of Ty1 transposition protein 107 BRCT domain (PF16770.4) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |