| Id Trinity | FTRINITY_DN53520_c1_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_180352 |
| Sequence | AAGAAACAATGTTCTATATATGATAATGGAGTCCGGTTTACCGGTGGAACCGTTACGGTACTGTGTTTTTTTAACTGCTTGTAGTTAAGTCGAGGTTCTT AATTTTTCTGACGAATCCAAAAACCCTCAATTCTTCATTTTCAATTCAATCTGAATAGGATCCTTCAATTATACTTGTACACCACAACACAAAAATGCGC GCAACCATTCTCGTTTCAGATTGATTCCTTCTTCTTCTTCTTCTATACTTAGGGTTTCATAGATTCTATTACATTGTTTGATTGGGAAATTTGTTATCGT TCTTGTTCAAGTTTCAATTTTTTAATTCCGTATGTATAACTCATACTGAAGGAGTGACAGATTGGGACTTTTCTTCTTCTTGTGAAATGGGGAAGCCTTT GTTTTATGAGATCTTGGAAAAACCAGCCACAAGTTGTATTATAGGAATTTGCAGTGCAATTTGGTTCTACATTCAGAAGAAAAATATTGGGTATTCACAT GTGGGTCTGAGTTATGAGAGTGCAATTGAGGGGCATTATTGGAGGATTATCACCTCTGCATTTTCACATATAAGTGTTATTCATCTTGTTTTTAACATGA GTGCACTTTGGAGTCTTGGGGTGGTAGAGCAATTGGATCACATGGGTCTTGGTATTGGTTACTATTTGCAGTACACACTTGTGATGGTTGTTTTGTCTGG AGTGTTGGTTTTGGCCATATACCACCTATTGATTCGAAGATTCAATATTGAGTATTTTCGTCGAGTGACGGCTGTTGGATATTCCTGTGTTGTTTTTGGC TGGATGACAATTCTTTCTGTGAAGCAGCCTTCTACCAAGCTGGAACTTTTTGGGTTCCTTTCTCTTCCTATCAGTTTCGCGCCATTTGAATCGCTCATAT TCACCTCAATTATTGTTCCTCAGGCGAGTTTTATCGGCCATTTATCAGGGATTGTTGTTGGATATGCTATTGCGTGGGGTTTGATTCATGGGATGAATAG CTACTGGGCGCTTTCCTTGATGGGTTGGATTGCACTTGTCTTTGTTTGGAGTTTGAAGAAATCTGGTGCTGTTGACCTCAACTTTCTTGAGATTGAATCT GTAACTGATCCTTCTTTACCGGTACGGTTTTTGGCATCAGGTAATGGCAGAACACTGCAGATGACTGCATTGCCAAATGGAAATGTTGACATCGTCTGAT TAATGTCAATCCAATTTATCATTGTGATGATATCTGATGTTGCCTTGACACACTCAATATTATAGCATTATGATTCTAATTCTTCCAACAAAGAATTTGT CCAATGCTTCATCAATATCCACTTTTGCAGTTTGCATCTTTATTCTTTAGTTGCATGATAATGAATGTTATTAGATACTATATATCAGTTTTGATGGTGT TACAGCTCTTTGCAAATCTGCTACCACCTTTTCTTCCTCCTCATATGTCACTTTGTTGCATTATTTAGGATTAGATGATATTAAGCTATTTTATCAACAA AAAAACATGATGATATTAAGCTATACTATTCTATCCTAATTGGTTGCTATAATCTGGGACCATGTTATAATATGTTACTGACTGTATGATCAAATAATTA TCTGGTTTGGTTTTGTATGATTTCTGGCTTTTCTGCTGTAGTAACTGCTCTCAACCAGAATGTTGGGAATGCACCAATGCAATTTGTATATTGAAGAAGT AATGCTGGCTAGTTATATTGAAAGGAAAACATGTTTCTTTTCTTTCTGGCATGGCCCTCTTATGTACATAAGAGAATCCAGATTCATAGTTAACCAATAA CCATTCATCTTTATAGTAAAGATCTTATATAACTTGATCAGTCTTGTATAATAGGGCAGTAGTTTTTTTCATGAAAAATGATTTTATAGTAAAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_34434; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_180352
| Blastp | RHOMBOID-like protein 13 from Arabidopsis with 78.97% of identity |
|---|---|
| Blastx | RHOMBOID-like protein 13 from Arabidopsis with 78.97% of identity |
| Eggnog | Rhomboid domain containing(ENOG41100KJ) |
| Kegg | Link to kegg annotations (AT3G59520) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019413063.1) |
| Pfam | Rhomboid family (PF01694.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |