| Id Trinity | FTRINITY_DN53534_c5_g1_i7 |
|---|---|
| Name Transcript | Ll_transcript_181396 |
| Sequence | AATCAGACACGTGCAATTATATAATCAATGTTTCTTTTTCTTTAATGTACTTCACAAACCCCTCATTCTACACACTCCTCCATCATTCTTTGTATCTTAA GAAACTTGCCATATTAACTCATTCATATTTCTTTCTATAACCATTTTTGTGTTTGGTTTTTTGTGGTTTAATTGGCTTCTTTGAGTATGTGATGTATGAG TGAGGTGGGTATGGGGTGGTTTGACTCACTGTGGGGAGAAGAAGGTCGAAAACTCATTAAAAGGAAGGACAGTGATGCTGCAGAAGCAGGTAGAGCATTG GAAGAGCTCAGAGCTTCACTCTACAATGAGCTCCGAACCTCGGAAGGAGCCAAACGCCAACAACAAAGATATTGTCCACCAGTGGTGGCATTGACCTTCA ACTTTATGGTTGCGGTTGGGATTATCATGGCAAACAAATTGGTGATGGGGAAAGTTGGCTTCAACTTCCCTATTTTCCTCACATTTATTCATTACATTAC TGCATGGATTCTGCTAGCATTTTTCAAGGCACTCTCTTTGCTTCCTGTCTCTCCTCCAACTAAAACAACTCCATTCTCTTCTCTATTTGCACTTGGAGCT GTCATGGCTTTTGCCTCTGGTCTTGCAAACACCAGCCTCAAGTATAACAGGTTCATTTTCTTCCTTTAACATCTATAATTCTATACAATAGTTAAAGACT TGGGACCCTCCTGCTTCTTAACAATCCAGCTCATGCAGTGTTGGTTTCTACCAAATGGCTAAGATTGCTGTCACCCCAACAATTGTTTTTGCAGAGTTCA TACTCTTTAGAAAAACAATTTCCTCTAAAAAGGTGAAGAATCCTACTATCCATTCCGTTTCTTTTCTGTTCTTCTCTTACATAAAGTCATGAAATATGCT GAAAATGACTATTCCACCACACCATGTGATTGCAATGGTGCAGGTTTTAGCTTTGGTTGTGGTATCAGCAGGTGTAGCAGTTGCAACTGTAACAGATATA GAGTTCAACTTATTTGGTGCAGTGGTTGCAATTGTATGGATAATCCCAAGTGCCATAAATAAGATTTTATGGTCTACTTTACAACAACAAGGGAACTGGA CAGCTCTAGGGTTGATGTGGAAGACAACCCCAGTGACAGTTTTTTTCCTAGGAGCTTTGATGCCCTGGATAGATCCACCAGGAGTTGTATCCTTCAAGTG GGATATAAACAACTCAAGTGCAGTTCTGATATCTGCTTTGCTTGGTTTTCTGTTACAGTGGTCAGGTGCATTGGCATTGGGGGCAACTTGTGCTACAACT CATGTTGTTTTAGGACAGTTCAAAACCTGTGTGATTCTACTTGGAGGCTATCTAATATTCAACTCAGATCCTGGGATTGTTAGCATTGGAGGGGCTGTTG TTGCTCTCTCTGGAATGTCACTTTACACAACATTCACCTTACAAGAATCTCAGCAAAATAGCAAGCAGCCACTTTTGCCTTCAACTAAGCCAAAATCAAC AAGTGAACAAGACACCACAACAGATTCAAATCTTAATACTACCACCATTGTTGTCTGACTCATGTGTAATTTATGACAACTAGGAAACCAAATTTCCCAG ATTCTCATATCCTTTTTGTATAGAGAGACTATAAACACCCAAACTTGTCCACTTCAAAAAGTCCAAAATTCATTTTTAAGAAAAGTTATAATAATTTTAT TTAATAAATAATTTCTTTCTTTCTCTAAATTTTCCATCAAATTATTACATCCCAAGTTAAACAACATGTTACTAATTTATTTTAACTTTCAGTCTTTAAA CATGGTAAATTTATTTGGTTATTTAAGGTAAATAGAGTTATTTGAGTGAGATAGGTGCGATAATGTTGTGTAACCATTTCCTGCACTCACCAATCTCCAT CTTATCTCCATCTCCATCTCCATCTCCATCTTCAAGATCAAAGCTTAAACTTTTTGTGTCCAACTCTGCGATGGATGATGGAGGCAGCAGCAAATTCAAG GAATTCCCTTTCGTTTCAAATCCACACAAAAACCTAATGCTTGATCTTGTTTCAACACTTGAGAACCGTTTTCACTCTCACCTTCTTCCTTCAACGCTTC CCTCTCATGTTCAGTATTACCAAAACCCCACTGCCACTGCTCAAGCTTCACTTCATATCAGATCTGCCCACGCTCATTCCCCGGTTACTCTCTATTTTCT TTATTCCATTATCATCTCTTTCCCACTATTATCTTTCATTTGGGTATTCGCCATTGCATGTATTTTCTTTTTGGGTGTTTTCACTATATATCATACTAAT GTGGGTTTCCAAATTTTAGTATTGACTATACACAGTGGGGTAGCTTTATTCCTTTATTGTACTCTAAATTGCCTTTACATGCTTCCTAATAATCAATCAA ATTTTAGTTGGGTTTACGAGTGCATGATGCTACCACTTAGTGAGGTCCGGAGAAAATATATGTACATGTCTTACCGGAGCGAAGAGACTCTTCGGATTTG AATCCGTGACTCTAGGTCATAAAACAACAACCTTAACAATGCACTTAACATAATAGGTTATAGAAATAGTTAATAAGCTTGTTTCATATGCTTATGTAAA TAAACACTTTTTAGCTTATTTTAAAATAGCTTATTGAATAAATAAGAGTTTAATTAAGTTGTTTAGTGCTTACCAGACACACACCAAGTTATTGATCTGT TTATATGTCTAAAATCTTTTTCTTTTGTAGAGTAAAGTGAGTACGGAAATGGCGTTCAGAGGGAAGCAGATGATGAACAAAGTTCTCAAAAAAGTTGGAG AAAAGAATTTGGCCCCGAGAGTGAAAGAATCGTTGGAGAAATACATACCCCAAAGCAAGGTTATCATGGGCCGTGCAAAACGTGGTCTCTTCGCTGGGCG ACACATTCAGTTTGGCAACAATGTCAGTGAAGATGGCGGTAACAAGACAAGGAGAACATGGAAACCCAATGTTCAAGAAAAGCGGCTCTTTAGTTATGCC CTCGATAAGCATATCCGAATTAAAGTCACCACCCACGCCCTTCGTTGCATAGACAAAGCAGGTGGCATTGACGAGTACTTAATCAAAACTCCTTATCACA AAATGGACACAGAATTAGGCCTCTTCTGGAAGGCAAAGATTGAGAAGCTGTATGAAGAACTTGGCAACAAGGAAGTTGTATTCTTTTCACCGGAGGATGA AGCCAAGTTTGAGCAGGGCTTCAAGGATTTGAAATTGTCCGAAAAGGAAGCACGGAAGGAAATCAGAAGAAAAATGTATGTCGGGATGAGCAAGAACAAG GTGATTGAGGTAGAACATAAAGGTGACGATCAATCTAAAATTGAGGAAGAAAAATCACATGATGCACCAAAGTTGGTTCCTGTTTCTTATGTGATAGCTG CTGATAAACTCAAAGTTGGAAGTGTTGTTTCTAATTAGTGCTATATTAATTGAAAATCACTTTTGTAAGAGCCATTTTTATATAGTTTTCTTTCAGACAA TCTACCAATAAAACTAATGATGGTGGTTTAAGCTGTATTAGTCCGTAGAGTATGATCCTTTTCAATTATTTTGATCTGTATTATTTCATAACCATTAAAA GGTAAAAGAATGTCAAGAACAGATTTCAAGAATTATTACGAGGAATGTTTCATGACATAATATTTTTGGATCCACACTACCTTTTGAAACTAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_34561; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_181396
| Blastp | 54S ribosomal protein L24, mitochondrial from Saccharomyces with 48% of identity |
|---|---|
| Blastx | Nucleotide-sugar uncharacterized transporter 2 from Arabidopsis with 61.36% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (YMR193W) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019456039.1) |
| Pfam | Ribosomal L28 family (PF00830.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |