| Id Trinity | FTRINITY_DN53535_c6_g1_i9 |
|---|---|
| Name Transcript | Ll_transcript_181035 |
| Sequence | CTTAAATTTATGTATCTATTTCCTCTCACATTTCCCGCGCACTTTCCCCAAATATCTTCTCAATTTCCCGCTTCTACTCTCTTTTCTTCTTCTTCTTTTT TCGAATTTTAAATATTTAATTTGATATGATATTACACCCTCAAACTACAACTTGGTGCGTGTGTTAACTCTCAAGTCTTAAATTTCATAGCAATTTCACT ATTACTTGGAAAAACTCCATGAACTGTCGCGAGGCTACTGTAGCTGCCACTGCTACAATTATCGGTGCGTTGGCCTCCGCAATCGCATTCCGTTTCTTTT ACCGTTCCCATTCATCCAAATCCATTCCCTTTCAAAACCACACCGTCTCCAATAACCGCTCTTCAATCGACCCTTTTGACCCTTCCAAGCGCAAAGGATA CTTGTCGTGGGATGATTATTTCATGGCAATTGCATTTTTGTCAGCTGAAAGATCCAAAGACCCTAACAGACAGGTTGGGGCGTGTTTGGTGAGCCAAGAT GGTATTATCCTTGGTATTGGATATAATGGATTTCCAAGAGGTTGTGCTGATGACAAGCTACCATGGGCAAAGAAATCCAGGACTGGGGATCCTCTGGAGA CGAAGTACCCAAGTAAATGCTATTCTTAACACAAATCATGCCTCTGCTGCTGGACAACGGCTATATGTAACCATGTTTCCTTGCAATGAATGTGCTAAAA TCATAATCCAGTCAGGAGTTTCTGAAGTCATTTATTTTGTAGAGAAGAGGTTAGAAAATTCAGATATTGCATATATAGCCTCTCATAAGCTACTTTCATT GGCTGGTGTAAAGGTGAGGAAACACCAACCACTGATGAATGAAATTCGCTTGAAGTTTGAAGAGCGCTAGATTTTGAAGCTTAGCATAAACTTAGCCTAT GTTCTCGGAGTCACTATTTTCAGAGTTACTGAAATAGCTTTATCGATTCTGAAATTCTTCTATTGCAGAAGAGAACCTATATTCAAATGGCTCCACAAAC CAAATAAGAACGAACAGTGATAGCATCTTTTGATCCTTCATTGTTACTCTGTACTTTAGCAAATAACCTTGTACCAAGTAAAGTGATAATTAAACATGCT ATATGCAAAATCATCTTTAGACAACTCTGAAGGGAGGATCAAGGCTAAGTAAGAAATGTTTATTGTCATTCCATTGTGTTTACTACCTACCACTTCTATT GCATTATTGTATTCTACTTTTTTTGATCTGATAGTTCAAAATAACTAACTTGATAAGAAGTTTATGTAACAGGAGTTGCAATAGACAAACCCAGTTTAGT AAAATGTGTGCAAGTTTATCTTAAAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_34575; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_181035
| Blastp | Probable deoxycytidylate deaminase from Sophophora with 45.24% of identity |
|---|---|
| Blastx | Deoxycytidylate deaminase from Pongo with 58.75% of identity |
| Eggnog | dCMP deaminase activity(COG2131) |
| Kegg | Link to kegg annotations (Dmel_CG6951) |
| CantataDB | Link to cantataDB annotations (CNT0000426) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019463479.1) |
| Pfam | Cytidine and deoxycytidylate deaminase zinc-binding region (PF00383.22) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |