| Id Trinity | FTRINITY_DN53535_c8_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_181050 |
| Sequence | AGAGAAGTTGAGAGAGAGTGATGATTAGATAAAGTTACTTCTTCTTCCTTCACTTACCATTCTCTATCTTCCAATTCCACTTCATCAATTCGACGTCGTT TCATCAAAGTTACTCTCTTTTCAACCATTCTATTCACCCCATCATTCTCAATTTTCACTCCTTCATCACCATCACCCATGGCTTCTTCAAAGTTTTGATT TTTATCTGTGATTGATGATTATGGAGTTTATGGGACCCACAAGATTGATCGGAGATTACATAGTGGGACCCAAAATTGGGTCAGGTTCATTCGCAATTGT GTATCATTCAACACATAGACACTCTGGTTTGGAGTATGCAATTAAGGAGATTCATAACAAAAATCTTAGTCCAAAAGTCAAAGAATGTCTTTTCAAAGAA ATTTCTATTCTTAGTACTATTCATCATCCCAACATCATTCGTCTCTTCCAAACTATCCAAACCAATGACAGGATTTACCTTGTTTTGGAGTATTGTGGTG GTGGTGATCTTGCTGCTTACATTCGTCGCCACGGCAAAGTCTCGGAGGCCACTGCAAGGCATTTCATGAGGCAATTGGGTGACTAATCAATGCAACTTTT CACTATATTTTGATTTCTCGTTTTATAATAAAGACGGGCAATTATACTAACCTCAATTTGACTTAATTACTTTCAGCATGTTTCTTGCTTCAAAAGCTAC ATTCACTTCAGTTGGAGATTTAGTTATCATCACTTATCTCGAAGGGAGGAGGTGAATGTAGTTTTTGAAGCAAGGAAGGTGTCACATTCACCTTCCATGA GATTCAGTAGGTGGTTAGTGTAAATCTTCAGGGGGGTGGGCGAGTGTGTAGCTTTTGAGTGAATAAGTGAGTGTAATTAAGTCAAAACTCAAAAGAGGTC GATGTAATTTTCCCGGAAAGGTTGATACTTTTCGTGATTTATTGCCTTTGTATTTGTGTTATGCATGCAAATTGGGAAACTATTTTTTAATTTCATTCTG ATTTTCTACCTTTTTATCAATCCTTGTTTTTCTTCTTCTTATAGCTGCAGGGTTGCAGGTGCTTCAGGAAAAGCACCTTATTCACAGAGATTTAAAACCA CAGAACTTGCTATTGACAAGTACTTCAGCTACACCACTCTTGAAAATAGGGGATTTCGGTTTTGCTAGGTCTCTCACACCCCAAGGGTTGGCTGATACAC TATGCGGTTCACCATTGTACATGGCTCCAGAGATAATCCAAAACCATAAGTATGATGCCAAGGCTGATTTATGGAGCGTAGGGGCAATATTGTTTCAACT AGTGACCGGGAGGCCACCATTTGAAGGAAATAGCCAGTATCAGCTTTTTCAAAACATTTTGAAATCCACTGAACTTCGGTTTCCTCCATCGGCTTTAAAA GAGCTACATTCTGATTGCTTGGATCTTTGCCGAAGACTTTTACGTCAAAAACCAGTTGAACGATTAACATTCAAGGAGTTCTTCAATCACAATTTCCTAC AGGAACCCAGGTCAATCATGCATGTTGAGCAGCCTTCATTGCGTCCATCCGTAATATCAATGGTTCAACAAGTAGATATCTCTGCTACTGGCAAGGTATC TCGATCGCATTATGGGCATCGTTTAAAGTCATTTGTAGACGATTCAAAGGTAGTAATCTCACCTCCCGATGAGACCATGCTGTTGCAGAGTATGGCTGGC GGTAAAAGTGCGCTAGAGTTATCTTCAACTATTGTATCTGATAAGCTGGGGAAGTGTATTCATGACAGTTTTCATTTTTCTAAACAACCTGAAGTTTCTG ATTTAATGGAGTCCATTGAGAGAGGTTATGTCCTAGTCGATTCTCTTTCCGAATCATTGGAAGCTTTCTCTGATTTTTCTGAAGCATCTTTTGAAGATAA TTCCACAAGCAGGGTTTCTATCTACTCTTCAAAGGGGACTCCTTTGGAAATTGGATTTGCAAAGCAAATAAACTATCCATCTTCTTGCTACACCGATGGA TTAGAAAATTCAAAAGGCAACGAGACTGAGGAATTAGTGTCGTCCTCTGCATTTGTTGCGTTAAGTAAAGTGCACTTGATTTCCTCACCGTGCCCTTCAA ACCGGATTAAGTTGTTGCATCTGTATGTGCAGATCCTTGCAGAGCTCTCACATGAAAAGTATAACACCGGAATGTATCTAGAATCGCTCGCAATTAAGTT GGTAGTTTTGGCTATATGGAAGAAAGCTCTAGAAATATGTAACTCTTGGTTTGCCTCTTATAAGAAGGGTTTATTGCATGGAAAATCTTCAGCCAATGAA TCCAGAATTCACTGTGGAAGTGGAAATGTGCGTACATCACACAACACTGAACAAAAAATAAGTTTTAGTGATCCTTCTTCTGTCTCCTTATGGATCAAAC AAGGGTTTATTTTTGCAATTGATTGTGCTGAGAGATTATCATGTCATATTCAAAATATGGATGTGCAGCTAAGATGCCAGATGCAATGGAGATCATATTC CAAAAAGCACTTTCAGTTGGGACAAATGGTGCTGTAAGTAAATCTCTTATATTGTCCACTTGTGAATTTTTTCCGGGCCTGTTTACGAGTTGAGTTTTGG AAGAGAATGTAGGGAAAGGGAAGGCTTCAGGGTCACGAAATATACTCGTGAGATAACTCTAACTTTTCCCTTTTGTCTCATTTGACTCCAAAATCCAACT CGCAAACAGACCGTAACTATCTAACTTTCCGGAAGGACCAAGAAAAAAACATGTCAAAGTGCACCCTTCAGTTTAGTCTCTAAAAAATAGAAAAACGTAA AAATCCCATTTTGGTTCTCAAGAATCTAAAATGTTGGTCAAATTAATCTTTTCATGATAGATTATCCGGACAATATAGTCCCTATCATGAGTTATTTTAT AAACCGTTCGACGTTTTCAGAGACCAAATTATTTTTTTATTTATCAAGGACTAAATTGGAGGTACAATTTTTCCTAAGATATTTAGTTCAAATCTTAATC ATTATGATTGAATCACTACTAGTTAAGTCTTTGCCATTTTTCTAGGTAGAGGAATATATGGAGAACAAAGATAAAGCAGCAGCATCTTACTCAAAAGCAA TGCTTCTATTTTCATTCATTGTTGAAGAAGCAGAGAACCTTTCACTTAACCCATCATTTTCACTCAATGCTGATACTAAGAACAGAATCTTACAATATAT TCTCAACCTTCAATCTCATCATAAATCTTTATCAGGGTCCTCTTCTAATAAGGCTGCAACAAAAAATCTTTGGACAAAGTAAATAATCTTTTTGCATAAT CACTTTTGAGATTCTGGATAAAGTGAAGGTTGGCTTCTAATTACACCATCTTGACATATAAGTATATAACCATGAACTGTATAGATAAATATATGACCTA CAATGTTTGTAGAGGGACTTTTGACATTACATAAGTTTATGTGTATAATGTCCTTAGTTTTTAATGTGGGATTTGTAAAGGGTGTATATATAACTTGTAT CTTTGTACAGTTCTGAATGCACTACATGATCATTGTATTCAAGTTTTTTTTTGAACTAAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_34580; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_181050
| Blastp | Serine/threonine-protein kinase ATG1a from Arabidopsis with 38.41% of identity |
|---|---|
| Blastx | Serine/threonine-protein kinase ATG1a from Arabidopsis with 43.76% of identity |
| Eggnog | Unc51-like kinase(ENOG410XR01) |
| Kegg | Link to kegg annotations (AT3G61960) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019418707.1) |
| Pfam | Protein kinase domain (PF00069.24) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |