Id Trinity | FTRINITY_DN53541_c1_g1_i7 |
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Name Transcript | Ll_transcript_182048 |
Sequence | AAAAAAGAGGTTGAATGAAGTAGAAGCCAAACACAAGTGAAAACCCTAATCGCAGAGAGAGTATTTTCTCTCTTTCTCATCACCGCAGAGTACTGCAGGA AAACGCATCTGAGTATTTGAGCTGGTTGATGCAAGAATTTGTAATTTTATTTGATACAAAAATTTCTGATTTTGAAGCACTTTGAGGGTCTCACAATTTT GGTTTTTTTTATGAGAGTGGTTTAAAAAATCTGAAGGAATATGAGTTGATCAATTTTGCATGGTTATTTGTGGTTCTTCGAATGATGATTTCATGGGTTT TAACCCAAAAAAAGTTAAGTTTGGTCGATCCACTTCTTCTTGGTATTGATCTTTGCAATTGGTTGCTTTTGAATACATGCTTTAAATTGATTCAATCAAA AGTTAAACTTATTCTGCAATACTTTGTAGTTAAAAAAAATCCCTGAAGTCTCATGTTTTTTCCTAGTGTTATTGCTGTGGAACAGTTTTTTAAATTGCAC TCAGCAACCGTAATTGTGGTCACAATATTGCGGTTTTGGGATTCTCCGCAAGGGCATCCTGACCACAATTACGGCTGCAACAGCCACATTTTCCTGCAAT TGCGGTAAACACAAAGTAACCGCAAGCACAACTGTAATTTAAAACAGCCGTGAAATTTCTGTTATTGTGGCACAGTACTGATTACACAGTCCCTTTGATA TTTCGGGGTGGGTGGTGATACTAATTGCAGATAGGTTAACCTTTTCTTTTTGTTGACGTTTTCAGTTTCCATAGAATTCTTTCTCGAAGCCAGAACACAT TCACACCTTTGGCATTGAATGTTTTTCAACTAAGTGTTTGAAAAAGTTTTTTAAACGTTCAGAATGTTTTTTAACTGAGTGCACATACTTTTTGTAATAA GTATTTCATTTAAAGATGTTATGCTAAGTGTAATTGATAAGATTTTGGTGCTTGAATCTAAATTGCAATTGCATTAGAAGACGCGTTGTATAAATGCTAA ATAAAAATAGCTACCTTTGATTATTTTTGGGACAGTTTCTTGGAGGTGTGGATTTGTATTTTTGTCGTGATGTATGATTTTAAGTTTGCAAACTTGCTGT TGCGACATATCACAAACACACCTAAGCACATGAGAATGCTGATGATATATATGGAGCCGTTGCTTTTTTAATGTCCATGCATAAACACATTAAAACGTTG CATGAAAAAATGATTGTTATGCAAGAAAAAGTAAATTTACTTTGTATTTTTTCATCATATACGGAAGTTTTCACACATTAGGAGCCATTTATGCAAATAA GTACTTCATTATTGGAGAGGTTATGGTTATATTCTACTGCTCTCTCTTGCATGTTTTAATCATTTTTTTTGTTCCTTATGGGATCACTTTTATTTGTCAA ATAGAATGCCATATTAGCTTGTGGGTATCACAAATATGATGCAATATGTAAGGCACAAATGATCAAGGTGTTATGTCTAATGCACTGGTATATCTGAACA TTATTCAAGACCAGGCTTCCTTTTATCATCAACAATGGCTGATGGTCAAGAATCAGACAAGAACATCGAGATATGGAAAATCAAGAAATTGATCAAAGCA TTGGAATCTGCTAGAGGTAATGGTACCAGCATGATTTCTCTGATAATGCCTCCCCGTGATCAAGTATCTCGGGTCACTAAGATGTTGGGAGATGAATTTG GAACTGCTTCAAATATCAAGAGTAGGGTGAACAGGCAGTCAGTGTTGGGAGCCATTACTTCTGCACAGCAGAGGTTGAAGCTATATAATAAGGTCCCTCC AAATGGATTAGTTCTTTACACTGGAACCATTGTCACTGACGATGGTAAGGAAAAGAAGGTTACAATTGATTTTGAACCTTTCAAGCCTATCAATGCATCA CTCTACCTATGTGATAACAAGTTTCATACAGAAGCTCTGAATGAACTTTTAGAATCTGATGACAAGTTTGGTTTCATTATTATGGATGGAAATGGCACCC TTTTTGGGACTTTAAGTGGAAACACCCGTGAAGTGCTTCATAAATTTACTGTTGATCTTCCAAAGAAACATGGTAGAGGAGGTCAGTCAGCTTTGCGTTT TGCTCGTCTTCGGATGGAAAAGCGTCACAACTATGTTAGAAAGACTGCAGAACTTGCTACACAGTTTTACATCAATCCTGCTACTAGTCAGCCTAACGTT TCTGGACTCATACTTGCTGGTTCAGCTGACTTCAAGACTGAACTGAGTCAGTCAGATATGTTTGATCCTCGCTTGCAGGCAAAGATATTGAATGTCGTTG ATGTTTCCTATGGTGGGGAAAATGGATTTAATCAGGCGATTGAGTTATCTGCGGAGATTTTATCAAACGTGAAGTTCATTCAAGAGAAACGTTTGATAGG GAAATATTTTGAAGAGATTAGCCAGGATACTGGGAAATATGT BLAST |
Tissue | flowers |
Gene name | LI_gene_34615; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_182048
Blastp | Eukaryotic peptide chain release factor subunit 1-3 from Arabidopsis with 96.03% of identity |
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Blastx | Eukaryotic peptide chain release factor subunit 1-3 from Arabidopsis with 96.03% of identity |
Eggnog | Peptide Chain Release Factor(COG1503) |
Kegg | Link to kegg annotations (AT3G26618) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019427587.1) |
Pfam | eRF1 domain 1 (PF03463.14) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |