Id Trinity | FTRINITY_DN53543_c0_g1_i18 |
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Name Transcript | Ll_transcript_180470 |
Sequence | AGTACTCCAGAGTTTTGTGTTAAGGCTTCTTCTGTGAAGGCTGCAATGCAAATACAGTGGTGTTCTGGAATGAGATTTAAAATGCCCTTTGAAACTGAGG ACTCTTCTAGGATTAGCTGGTTCATGGGAACCATTTCTTCTGTCCAGGTTGCAGATCCCATTCATTGGCCTGATTCTCCTTGTCGTCTTCTTCAGGTACA TGGTTTAGATTTTCATCATTTGTTGTCTCAAAAGGTTCTACATCTTGGAATATTTTTTCAGTGATTTGCGTACTATATCATTTATATTTTAAATTCTGAG TAATACAGAAAATGTATCTTGAGTTTTAACTTTAATGAACCGATATTTTCTCTTAGAGTAACTTGATCACCACTCATATATATATATATATATCATTGTT CAGTGCTGCAAAAAGATGGACAAATTGTGTGTGTACAGAGCAGACAAATTTTCCTGCAGAGTACCAAAACTGCTTGAATTTTGTCAATTGCCTGTGGCAG AACTATGCAAGTTTAGGAAGCATTTCTGTGGCTGAATATCTTGATTAAATAATTGAGTCGGTATCTATTTGGGTTTAAGTTTGTTTAAAATAATCAAGTT TTCTCTAATTTTTTTCTGTGGTGTCATGTTTCAGGTAGTGTGGGATGAACCAGACCTTCTTCAAAATGTTATGTGTGTAAACCCTTGGTTGGTTGAACTA GTCACAAACATGCCCACCTTCCATCTCTCTCCATTCTCACCACCAAGAAAGAAACAAAGGCTTCTACAGGACCCAGAGTTTCACCTCAACAACCAACTAC CAATGCCATCATTCTCTAGCAATCTTCTCAATCATCACACTAACTCTCTACATAACATTCAAGACCATAGTTCTTCAAGCATACAGGGAGCCAGGCATGC TCAATTTGGACTAACTCCATCTGTTTTTCCCTTAAACAACAATAAGCAGCTACAACCAGAGATGCATCTTTTTGGCTTCCAAAGGCTTAACCATGCAGAA AAACCTGTGAGGCCACCTTGTGGAATCTATAAAAGCAGTACTAAGAACAATGTTGACATATCTTGCTT BLAST |
Tissue | flowers |
Gene name | LI_gene_34635; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_180470
Blastp | Auxin response factor 18 from Oryza sativa with 45.58% of identity |
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Blastx | Auxin response factor 10 from Arabidopsis with 81.82% of identity |
Eggnog | auxin response factor(ENOG410ZZ2C) |
Kegg | Link to kegg annotations (4341882) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019452743.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |