| Id Trinity | FTRINITY_DN53543_c0_g1_i19 |
|---|---|
| Name Transcript | Ll_transcript_180471 |
| Sequence | GTTCTCTTATATAATAGATTAATAGCTAAATAGGCACTGTTAATGAAAACTAACTCTGCTTTTTTTTTCAGATTCTGATAAATAGCATTTCATGTGATTC AGTAGCCATTCCAATTCTCCATTTTCAATTGGTTTTCACAAAATTCCTTCAAAGAGAGAGAAAGACAGAACCATCAGCACAAAAAATCAAAACTTTAATT CTGATCATGCCAATGAAGGAATCTCAAAAGAGCTTGGATTCTCAACTATGGCATGCCTGTGCTGGTGGCATGGTTCAGATGCCACCACTTAACTCTAAAG TGTTCTACTTTCCTCAAGGGCATGCTGAACATGCACACACCAAGTTGGATTTTGTGGATTCAATGAGGATTCCACCTTTCATTCTTTGCACTGTTGCAGC AGTGAAATTCTTTGCTGACCCTGAAACAGATGAAGTTTTTGCAAGGGTAAGGTTGGTTCCTTTGAGAAACTCAGAGGTTAATTATGATGCTGATGGTGGT TGTGATAATGTGTCTGAGAATTCAGAAAAGTCTGCTTCTTTTGCCAAGACATTGACTCAATCTGATGCCAACAATGGTGGAGGGTTTTCAGTTCCTAGAT ACTGTGCAGAAACCATGTTTCCAAAGCTGGATTACTCGGCCGAGCCGCCGGTTCAGACCGTGATTGCTAAGGATGTTCATGGTGAGGTTTGGAAGTTTAG GCATATCTATAGAGGCACGCCGCGGCGCCACTTGCTTACAACTGGTTGGAGCAGTTTTGTGAATCAGAAGAAACTTGTTGCAGGTGATTCTGTTGTGTTT CTGAGGACTGAAAATGGTGATCTTTGTATCGGAATTCGTAGGGCCAAAAGGGGAATTGGTGGTGGATTAGAATCCCCATCAGGGTGGAGCTCTGGTGCTG GAAATTGTGGTATTGGACCTTATGGTGCATTTTCTGTTTTCTTGAGAGAGGATACCAACATTTTGAGAAATGGTGTTGGGAACTCAAGTCCTGGTGGTGT TAATTTGAGTGGAAGTGCAAAAGTGAGCCCAGAATCTGTGAGGGAAGCTGTGGCACTGGCTGCTACCAATAAACCATTTGAATTTGTTTATTATCCGAGA GCAAGCACCCCCGAGTTTTGCATCAAGGCTCCAGCAGTGAAGGTGGCTATGAGAATTCAATGGTGCTCAGGGATGAGGTTTAAGATGGCCTTTGAAACTG AGGATTCTTCCAGGATAAGCTGGTTCATGGGGACCATAGCTTCTGTTCAGGTTGTTGATCCTATCCGCTGGCCTAATTCCCCTTGGCGACTTCTTCAGGT ACTACTCTCTGACCCTTTGTTTAATAATCTGGTTCTTAAACTATTGGTTCATATGAGCCATAAGGGTTCAACATGATGCCGAATGTTGGAGCCTGTATTC CTGATTTGTGAAGCTCTCTATAGAACCTGGTTATGTTAATATATATAAAAGCGACATGCTTGAACAAAGTGGATATGGTAGAAGGTTTTATGGTTATATG TGCAGTTTTAATGTAAATACCCACATGCCAGAGTTTGAAATGTCAATTGTTTATTAAGGAGATGTTTCCTTTGTATGCTCAAAACATAGTTCAAATCAAC ATAGTCCTATGTAAAAGCTTATGATGTAATCTTGAATGATCTTGCTGATATCAATCCAGGTTACTTGGGACGAACCGGATTTGCTACATAATGTGAAGCA TGTAAGCCCATGGTTGGTTGAATTGGTATCAAACGTGCCAGTCATTCATCTATCACCCTTCTCTCCACCGAGGAAGAGGCTTCGGTTTCCACCACACTCG GAATTTCCCTATGATGTTCAATTTCCAATACCAATGTTTTCGGGCAACGCCGTGGGGACTAGCAGTCCCTTGCGTTGTCTATCTGATAATGCTCCTGCAG GCATACAGGAAGCCAGGCATGCTCAAATTGGAAAATCTCTTTCAGATTTCCACTTTCACAATAATAAACTCCAGTTAGGGGTGCTTCCAACTAACATTCA GCAGCTAAATTTGAATGCTGCCGGAATTTCTAATGTCAACATGACGAACCATGACAAGAGTAAAGAAAGCTTGTCATGGTTGCTGACCAATGGAAATTCT CATAAGAGTTTGGAGAAATCTAATAAAGTTAAGAGACACCAATTTTTACTTTTTGGTCAACCAATACTAACCGAGCAACAAATTTCCAGAAAAGCTTGTT CTTGTGATTTGTTGTCTCAGAATTGTAGTGCTGGGAAAGATTCACCAGATGAGAACAAGGACAAAGAGAAGAGTTTTTCGATTGACTCTCAATCTACACT TTCGCAGCAGTTTTCACCCGCAAAATCTTGTACTACTGAGCCTTGGCATCTGGGTTTGGATACTACTGGTCATTGTAAGGTTTTCATGGAGACAGAAGAT GTTGGAAGGACCCTAGACTTGTCAAGTTTTGGTTCTTATGAAGAGCTTTACAGGAGACTGTCCAACATGTTTGGAACAGAAAGGTCTGAGATGTTGCGCC ACGTACTCTACCGTGATGCAACTGGTACTGTTAAGCAAATTGGAGAAGAACCATTTAGTGATTTCAAGAATACAGCAAAAAGATTGACTATTCTGACAGA CTCAAGCAAAGATACTAAAAGGACTTGGATAGCAGGAACTCTGAATGCTGAGCATGGATTGGATGCATCTAATAAGACAGGTTGTTTGAGCATATTTGCT TAATATGGCGTGGAATGTATGATATTATTTTCGTATATCAGAAGTTGAAGGACACAATTATCTTACTTGTTAGAGAGGCTCACTATGAACTGAACCTTTT ATCAAGATTGGAATCTTTGTTTTTCTTAATGTAAAAAACAATGACTATTTCTGTGTTATGTTCAAATTGTTATTATAATGTTAACCATCATGTTCTGATT AGTGAGTTTAGTTTTCTCTAAGCTGCCACAATAAAATAGTAATAGGGTGAAGTCATGATCTGCCATTTGTTGGATTCATGCCATGGCCAGTGTAGTTTGT GTGATAGGCAATATAACATTTTTGAAATGTGTATGAAATGTGTAAGAGCATTTACGGTGGTTGTTCTTAACGGAATAAGAATATTCTTATTCTGTTCTCC ACCGTGGTGTTCTTATTTCTTGTGTTTTGTTCTTATTTAAGAACAAAAGTGTTAAATAAGAACACTCCTTGTTCATGAGAGAGAAGGGGAATGAAAACAC AATCCAGCCAAATAAATACAACCAAAACATTTCCAGAATCGTCAACATACCCA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_34635; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_180471
| Blastp | Auxin response factor 16 from Arabidopsis with 65.79% of identity |
|---|---|
| Blastx | Auxin response factor 16 from Arabidopsis with 64.6% of identity |
| Eggnog | auxin response factor(ENOG410ZZ2C) |
| Kegg | Link to kegg annotations (AT4G30080) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019436276.1) |
| Pfam | B3 DNA binding domain (PF02362.20) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |