Id Trinity | FTRINITY_DN53554_c5_g1_i3 |
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Name Transcript | Ll_transcript_180222 |
Sequence | GCAATGTAAAGTTTTTTACACTGTCAGTCCATCATTCACCATTGATTTGTATTACTTTTGTTGGACGATCAATAATGATTAACAAAGCTTTCATATACAT AAGTGACAATTTCATATTTGGCTGTGTAGGATAACATTCAAGAGGATTGTAGCCAACAAATCCACAGAGAAGTTTTCGGGCATTCCATACATTATGACAC TTCTCAATTGTCTCCTTTCTGCTTGGTATGGTTTGCCTTTTGTGTCTTCGGACAACATACCGGTATCAACTATCAATGGAGTTGGAACAGTGATTGAAAC CATATACATTATGATCTTCATCATATTTGCACCTAGGAAACAGAAGGCTAAAATTATTGGCCTCTTCACTTTTGAGCTTGCAGTGTTCTCTATTGTTGTC TTTGTGTCCCTCTTTGCACTGCAAGGCAGTTCCAGGAAGCTCTTTTGCGGCTTCGCCTCAGCCATATGTTCCATAATCATGTATGCTTCGCCCCTCTCCA TTATGGTAAGCTAATCATTATGATTTTGCACCACTCTTTCTAACAAAGTAAGAGCCTTGTAGACTGAGTCGGCTTTAGTTGACATTTTTTAGAAATCAAT CTTTTATTTGAATACCAAAGTTTTTACAATAGTAAATAATGACTGAATTATTGATTAGCAAACTGTACAAATTGGTGTTAGAGAGTAAGAATTAGGGCAC TTTCCTGATTAGTAAGAACAATATATAGTCCTGCTAAAGTGGCAAAGATATATTTACTAAAATGTAATGAGTGACCCACATAACCAATCATGATAGATCC TTATACCAAAAGGATGCATTTTTATCTCCAATGGGACCATGTTCTCTTCTTTCAAACTAGGAAATGGTCCATATCCCAAAGAAAAAACTAATGACTTATT TCTGTTTTTGAAAATAAGCTATTACTCACTTTTTCTTGCACTTTATTAAAATAATAGTTAAATAATTGATGTACCCAAAATATTTTCATTTTAAGCTATT ACTCACTTTTTCTCAAGCATTTTCCTCTATTCTATTGTCCTCCAAAAAAGGATTAGATGTTAATTTTATTTTGCGCATGTAAAACCATACAAGAAACCAT GCTATATCTTTCAAATTAGCAATATTCAAAATACTATGGTTGTATTTACTATGGATTTGAAACTATGTGCAGAGAGTAGTGATCAGAACAAAGAGTGTGG AGTTCATGCCCTTCTACTTGTCCCTTTTTGTGTTTCTATGTGGCACTTCATGGTTCATCTTTGGCCTACTAGGCCGTGACCCATTTTTAGCTGTACCTAA TGGTGTTGGTTCTGGTTTAGGGGCAATACAACTAATATTGTATTTCATATACCGTGACAACAAAGGTGCACCAAAGAAACAAACACCAATAGAGGAGGAA ACCATGGAAATGGGCCACATAAAACACAGTGAAGAGAAGCAATCAAATGCAAATGGAATTAGAAAATGACATTTCTAACTTGGGGCTAGTTTTGGCTCAA AATAAAGATTAAAAGCCAACTATCAATCGTATTTGTTATTATAAACTTCTTATCCTATGTATGATAAATGAGTATGTGTTTGTTTGCATCCTTGACAGAA AGAGACCTAAAATTAACCATTGGTCAAATCTCCCTCATTACCATTAGGTATTGTTATTTATGGAATATAGAATAAATCTACTTCATTTTAATCCTATAAA TATAATTGTTCTATTATTACTAAAAAATTGAAATAAATATGAATTTTTTGTTCAAGATAATTTATTGAAAATAGTTGTCCATAGCGGCAACGTTTGCGTT TGAAATATTTATAACAATTGACTATGCTATTTTTTATTATTTATGACCAGTTGTATGCATTTTACATAAACTTACTATACCGAAATCTTAATTACTT BLAST |
Tissue | flowers |
Gene name | LI_gene_34719; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_180222
Blastp | Bidirectional sugar transporter SWEET1 from Arabidopsis with 71.15% of identity |
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Blastx | Bidirectional sugar transporter SWEET1 from Arabidopsis with 72.8% of identity |
Eggnog | sugar transporter(ENOG4111M4R) |
Kegg | Link to kegg annotations (AT1G21460) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019416247.1) |
Pfam | Sugar efflux transporter for intercellular exchange (PF03083.15) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |