Ll_transcript_180116

• Id Trinity: FTRINITY_DN53571_c3_g1_i1
• Name Transcript: Ll_transcript_180116
• Sequence: GTGCAACCCGAGTTCTTTACAGACAACAATTTAAAACATCATGCCTTAGACTATTTGCTTATTCATGTTCCTTGTTAGAAAAATTGAAGTTATGATTGGC CAGCAAGAAGGGTGAATAAGTAATTACAAGTGTGTATTTTCTATTTTGTTTTGTTTGTTTCATTGCAGAATCTTTGCTCTGCCACGGAATGTTGCAATTT GGCTTTTTATGATAATTATTGGTGGTTCATCCATGTAACTATATTTGTTTGTAGCCCCTTAATGCATTTGAGTTGATTATTGAATATTGATAATGATTTT GAAGTCTTTTACAGAAGCAAATCTCAGTTACTTTATGAAGATTTAAACTTGAATTAGATGGGTTGTGGCTGAGATAGTAAGATTTGATTTTGGGAATTGG ATTCTGGAGTGTGACTAGGCAATATGATATTTTTAATGGCATAGCATAATCTATGGCTGTTGCTCTTGGCAGAATGCTTCCACTGGTTTATGGCTGCACT AAATTGGAACTTTATGTGGTATTTAAAGTGCATATCTTGCTTTAAAATCTTTTTGCGTATACCACATTTCTAGTTTGAAAAGATTAAGTCGAATTTGTTT TTAACAAGTTTTTGGAGATGCAATATTTTATTATTTGTCAATTTTTCGTTTAACCAGCAAATTCCAATTGTCGGTATGGGCTATGGAGCTATGGGTAGTT GCTAATAATTCCTTAATTCAATATGTGCATCATCCATGTTTGAAATTTGAAAATTAGGGACAAATGCAAGTCAGTTGGCAGTTGTGGCATTCTCCAGACT ACAAAAGGAGATTGCTAAAGATGGTAGAGAACCGAATATGGTGTCCAATGGGGTGCATAACAAATCCGTTTCAAGAAAAGGTTCCGATGCAGGATCCTCT GCCACAACAAAAGAGATGAGTGCCCTGTCACAGTTCTGTGTGGATCTCACTGAACGTGCGAGCGAAGGGCTAGTCGATCCAGTCATCGGCCGAGAAGTTG AAGTTCAGAGAATTATTCAAATACTAGGCCGGAAAACAAAAAGCAATCCCATTCTTCTTGGTGAAAGTGGTGTCGGAAAAACAGCTATTGCGGAGGGGCT GGCAATTCATATTGCTCGGGCGGATATTGCTCCTTTTTTATTGACAAAGCGTATCATGTCGTTGGATGTTGCAATGTTAATGGCTGGGGCAAAAGAGAGG GGAGAACTAGAGGAACGAGTTACGAAATTAATAAAAGAGATAATAAAGTCAGGTGATGTCATTCTTTTCATTGACGAAGTTCATACACTTGTTCAATCAG GGACAAGTGGGAAAGGAAATAAGGGATCTGGCCTTGACATTTCTAATTTACTTAAACCTGCACTTGGAAGGGGTCAATTTCAGTGTATTGCATCTACCAC CATAGACGAATACAGGCTTCATTTTGAAAAAGATAAGGCATTGGCACGAAGATTTCAACCTGTTTGGGTTGACGAGCCAAGTGAGGATGACGCAGTTAAG ATACTTATGGGTCTACGCGAGAAATACGAGGCACATCACAAATGCAGATTTACTGAAGATGCCATAAAGGCTGCAGTTAATTTGTCATCAAGATACATAT GTGATAGGTATCTACCTGATAAAGCGATTGACCTCATTGATGAAGCAGGAAGTAGAGCTCATATTGACGACTTTAAGAGGAAAAAGGAACTAGACAATTG CGTACTTTTGAAGAGCCCCACTGATTACTGGCAAGAAATTAGGGATGTCCAGGCCATGCATGAAATGGAGAGCAAACTTAAATACTATGGCACTTCTAGC ATTGATGATACTAGTGAACTTATAGTGGACTCATATTTACCTTCTGAAGCCAATGATAACGAACCTGTAGTAGTTGGACCAGAAGATATAGCAACTGTTG CTTCCATTTGGTCAGGAATTCCTGTTCAGCAGCTCTCTGTTGATCAAAGAACTCTGCTCCTAGATCTTAATAATCAACTTCGCAAACGTGTGATTGGACA AGACGAGGCTGTTCTTGCCATTTCTCGAGCCGTGAAGAGATCACGGGTTGGCCTTAAGGATCCTGATAGACCCATAGCTGCAATGCTATTCTGTGGCCCA ACTGGGGTTGGGAAAACTGAACTTGCAAAATCTTTGGCGGCATGCTACTTCGGATCAGAGGCTGCCATGATAAGATTAGACATGAGTGAATATATGGAAC GGCATACCGTGAGCAAATTGATAGGATCACCCCCAGGTTATGTTGGTTATGGAGAGGGGGGCATTTTAACCGAAGCTATTAGAAGAAAACCATTCACACT GTTATTGCTTGATGAAATAGAGAAAGCTCATCCGGATATATTCAACATTCTTCTTCAA
• Tissue: flowers
• Gene name: LI_gene_34864;
• Additional information: details;

Expression of Ll_transcript_180116

FPKM

• FPAB: 88.6
• FPNAB: 4.2
• LF1: 6.2
• LF2: 7.7
• LF3: 26.7
• LF4: 53.2
• UF1: 3.5
• UF2: 6.1
• UF3: 59.9
• UF4: 54.5

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_180116

• Blastp: Chaperone protein ClpD, chloroplastic from Arabidopsis with 74.04% of identity
• Blastx: Chaperone protein ClpD, chloroplastic from Arabidopsis with 71.67% of identity
• Eggnog: ATP-dependent CLP protease ATP-binding subunit(COG0542)
• Kegg: Link to kegg annotations (AT5G51070)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019429737.1)
• Pfam: ATPase family associated with various cellular activities (AAA) (PF00004.28)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;