| Id Trinity | FTRINITY_DN53579_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_181541 |
| Sequence | GGGTATACACTTTTTCCCTCTCTTCCTTCACACTATCATTTCATTTCTCTTTTTTCTCGTTTCTCTCCAAAATTCCTAATATATCGCCACGCGCTACGAT ATTTTGTTCTTCTATATCTCACCTGCTATTGTTTTCGATATGTTATGTACTTCAAATGCGGATTTTATTTTCTGCTAACTATTCCGAGTTTGTAATTTTG TTTCCTTTTCGTGTTTCGTAGCTCTTCGTTGCTCAATTTTTGTTTCGTTTCATTTCGGTAAAATAATTAGTAATCTGTGCCCTTATACAGTGTGCTCTGT TTCCAGTTTTTGGTTGTTTTGTTGCAATTTTTAGATTATATTTTTTATTCTGAAATATAGTTGCATATTGATTTATGAGCATGCTTGATTCGTGTCTCAA ATTTATGGACTTGTATTTTTTGGGGAAGTTATCATAGGAAGAAAGAAATGGCAATATCATAGAATAGTGCTTTATTAATGTTCAATGAAGGAGTTTTACA ATCTTGCAAGTGAAAGAATATTTTGATTGTGGAGATTTCCATCTAATTTCATCAATAATGTGTATTTCATTAAGTGGCAAAATCGTCAATGCCGTTAATA CTTTTAAGTGCATTTGGTTGTCTCCATTTCCCCCTTTATTTTTGAGCATACACTGAGAAATCTGAACAACACAATCCATTTACTGTGTGCGCTCACATGG TCACATTGTGTAATTTGAACACCTATCTTACCTTACATGTACTTAATCTTGAAATATACAGTTTTGGACTTTTTTGGTTATTGAAGAGAATTATATGTCA GCATACAATTATGGTAACCTTAGTGTGTGCCATGGTTAAATTTTTTAGCTTTTCTTGCTGTGCCATAGCAAGATTGCAATGATGTCTATAATTATGTCGA AGTCTGGCTGTCTGCGTTTGTCGTTCAATAAATATGCTTTTAGTATTAACACCAAATCTAGACATAGTTAAAAATGATATAATTTGGCGTGGATTACATT CATTTAAAATGGTAAGTAGAGATTCAGTTCATTTATTGAGGGGTATCTTGTCTTTTCAAGTTGGTGCCAGTGTTATAGTAACATTACATCGAGTGCTGCC TGAAAATTTGCTTAAAAAATTAGATCTTGTATCATTTTGCATTAATTAGATATCATTCCTTACTTTAAGCTGTTATGCTTTCTCTTGATACCGAAGTCGA AAGATTTCTGGATGAAATAAGTTATGGAGATGGACAGCCACCTCCTCAACTCCTAAAGTAGTCCCTCCCATCAACACTTTATTTGTGAGATTAGTTTTCT CATGCTTACAAGAAGCTTTACACTCAGTACAATGCATCTGTGTTCGTCTGTACATGTGCCTTTTTGACATTTTGCGAGAACATCTACTTCATTTCGTTGT TTGATTTAGTTTTTTCTACTTTGGCTGTGCACTTGGTAACGCAAGGCACACTCGAAAGATGTTGAACTAGTTTTGCAAGTTTTATAACATGACAACTTTA TTGTTCTCTTAGATTGACCAATAGGCATGCAACTATTGCCTTATGGGTTTTTGAATCAAAGTTTTATGCATTTCTATTAACGCAAAGATGCTCGTTCTTC AGGCTTATTGAACTCTCAATTGGGCTCTAGTTGTTGAACTCACACCGTAAGCATTTTTGGCTTTGATTCCAAGATGAACAATTCTCACACTGAAAATCTT GAGGAGCCAACTGTTGTGGGATTTGAAGTTCCCAAGTCTCCTGATTCTAGTTACAATAATGTATACACTGGACACGAAGACGAGGCACGTGAACCACCTT TTGTCCCCTTCCATTTGCAACACACCTTGCTCAGCTATCCTGCAAATAGCAGGGATAGTTCCGGAAGTCTTCCATTGCCTCAGAATGTGATTCTAAACCA TCTCTATATTGAGAATAGAGAGTCTTCAAGATCTGTTGTGGCATTAGGATATACCCATCGCTTCCGTTCTAAATATGTTACTGTCGTCCTTTACAAACCA GTCCAAAGAAGTTGAACTAGCATTCAATGTATATTTAAAAACCTTCGTAATTGTTGGTTTGTAATGATTAGACTCGATATATATTCCAATTAGCAGGATC TTTTATTGAACTTTATATTGTTTGTTGGTAACTTTGCTATATATTTACTTGCAAATTCATATTAATACTAAGTGGCATATAGCCTAAAGGTTAGAAGTTC ACAACAGTGGCTGGTCTAAAATTGACAATATCTTAAGCCTAAAACCTTGTTTGACATCGCGCATTTAGTGGAAAGTCTTAATGTAATG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_34942; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_181541
| Blastp | SNF1-related protein kinase regulatory subunit beta-3 from Arabidopsis with 62.61% of identity |
|---|---|
| Blastx | SNF1-related protein kinase regulatory subunit beta-3 from Arabidopsis with 62.61% of identity |
| Eggnog | Protein kinase, AMP-activated, beta(ENOG410XRB3) |
| Kegg | Link to kegg annotations (AT2G28060) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019451440.1) |
| Pfam | 5'-AMP-activated protein kinase beta subunit, interaction domain (PF04739.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |