| Id Trinity | FTRINITY_DN53579_c0_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_181552 |
| Sequence | ATTATATTTTTTATTCTGAAATATAGTTGCATATTGATTTATGAGCATGCTTGATTCGTGTCTCAAATTTATGGACTTGTATTTTTTTGGGGAAGTTATC ATAGGAAGAAAGAAATGGCAATATCATAGAATAGTGCTTTATTAATGTTCAATGAAGGAGTTTTACAATCTTGCAAGTGAAAGAATATTTTGATTGTGGA GATTTCCATCTAATTTCATCAATAATGTGTATTTCATTAAGTGGCAAAATCGTCAATGCCGTTAATACTTTTAAGTGCATTTGGTTGTCTCCATTTCCCC CTTTATTTTTGAGCATACACTGAGAAATCTGAACAACACAATCCATTTACTGTGTGCGCTCACATGGTCACATTGTGTAATTTGAACACCTATCTTACCT TACATGTACTTAATCTTGAAATATACAGTTTTGGACTTTTTGGTTATTGAAGAGAATTATATGTCAGCATACAATTATGGTAACCTTAGTGTGTGCCATG GTTAAATTTTTTAGCTTTTCTTGCTGTGCCATAGCAAGATTGCAATGATGTCTATAATTATGTCGAAGTCTGGCTGTCTGCGTTTGTCGTTCAATAAATA TGCTTTTAGTATTAACACCAAATCTAGACATAGTTAAAAATGATATAATTTGGCGTGGATTACATTCATTTAAAATGGTAAGTAGAGATTCAGTTCATTT ATTGAGGGGTATCTTGTCTTTTCAAGTTGGTGCCAGTGTTATAGTAACATTACATCGAGTGCTGCCTGAAAATTTGCTTAAAAAATTAGATCTTGTATCA TTTTGCATTAATTAGATATCATTCCTTACTTTAAGCTGTTATGCTTTCTCTTGATACCGAAGTCGAAAGATTTCTGGATGAAATAAGTTATGGAGATGGA CAGCCACCTCCTCAACTCCTAAAGTAGTCCCTCCCATCAACACTTTATTTGTGAGATTAGTTTTCTCATGCTTACAAGAAGCTTTACACTCAGTACAATG CATCTGTGTTCGTCTGTACATGTGCCTTTTTGACATTTTGCGAGAACATCTACTTCATTTCGTTGTTTGATTTAGTTTTTTCTACTTTGGCTGTGCACTT GGTAACGCAAGGCACACTCTGAAAGATGTTGAACTAGTTTTGCAAGTTTTATAACATGACAACTTTATTGTTCTCTTAGATTGACCAATAGGCATGCAAC TATTGCCTTATGGGTTTTTGAATCAAAGTTTTATGCATTTCTATTAACGCAAAGATGCTCGTTCTTCAGGCTTATTGAACTCTCAATTGGGCTCTAGTTG TTGAACTCACACCGTAAGCATTTTTGGCTTTGATTCCAAGATGAACAATTCTCACACTGAAAATCTTGAGGAGCCAACTGTTGTGGGATTTGAAGTTCCC AAGTCTCCTGATTCTAGTTACAATAATGTATACACTGGACACGAAGACGAGGCACGTGAACCACCTTTTGTCCCCTTCCATTTGCAACACACCTTGCTCA GTTATCCTGCAAATAGCGGGGATAGTTCCGGAAGTCTTCCATTGCCTCAGAATGTGATTCTAAACCATCTCTATATTGAGAATAGAGAGTCTTCAAGATC TGTTGTGGCATTAGGATATACCCATCGCTTCCGTTCTAAATATGTTACTGTCGTCCTTTACAAACCAGTCCAAAGAAGTTGAACTAGCATTCAATGTATA TTTAAAAACCTTCGTAATTGTTGGTTTGTAATGATTAGACTCGATATATATTCCAATTAGCAGGATCTTTTATTGAACTTTATATTGTTTGTTGGTAACT TTGCTATATATTTACTTGCAAATTCATATTAATACTAAGTGGCATATAGCCTAAAGGTTAGAAGTTCACAACAGTGGCTGGTCTAAAATTGACAATATCT TAAGCCTAAAACCTTGTTTGACATCGCGCATTTAGTGGAAAGTCTTAATGTAATG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_34942; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_181552
| Blastp | SNF1-related protein kinase regulatory subunit beta-3 from Arabidopsis with 62.61% of identity |
|---|---|
| Blastx | SNF1-related protein kinase regulatory subunit beta-3 from Arabidopsis with 62.61% of identity |
| Eggnog | Protein kinase, AMP-activated, beta(ENOG410XRB3) |
| Kegg | Link to kegg annotations (AT2G28060) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019451440.1) |
| Pfam | 5'-AMP-activated protein kinase beta subunit, interaction domain (PF04739.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |