| Id Trinity | FTRINITY_DN53587_c0_g2_i12 |
|---|---|
| Name Transcript | Ll_transcript_181179 |
| Sequence | CATACATTACTTTTTATATTTTATTGTTATTACCAAACTCAACCTAAAAAATAACATGTAACGAACTCGAGTTAAGTTTCGAGTCAAACTAATCTTTATC GAGCTAAATTAAACTGAACTCTTCAGGTAATATTTCCTCTTAGTAAAGTCTCAATTCGAATCTTATAGATGGAAAGATGACTAATAAAAGAAAAGCTTGA TAGGAATGTATCCATATTAAAATTATAATTTGAAATTATAAGATTAAGAAGGTATTTATTTGTAAATGAGGTGTGAATATAAGTTTTTGTGTTAAATAGA ATAACTAGAATCAGAGATATGAGAAAAGAAGAGAAGGTTGGAGAGAAGGGGAAAGGGTTTGAATGATTAGTGATTAGTGATTAGTGATTAGTGATTAGTG ATTAGTGATTAGTGATAGCTAAGTTAACGAAGCAAAGAAACAAAGAAGTAAGTGCAGTAGCCTTCGGTTGTAGCCAACATAACCAAACCCCTATGGATGA AATGGAGGACGAAAGAGCAGCAGAGCTTCTCTTCACACGCTTGCAGGATTCCCCGGATGATGCATCTCTTCATTTTGATATTGGCATATTGTTATGGGAA AAAGAAGACACTAAGGAAAAGGCTGCTCAACATTTTATCATATCTGCCAAATTGAACCCTAATAATGGACAAGTTTTCACATATCTGGGCCATTATTATA GCAGCACTAGCAATGACACTCAGCGAGCCATTAAGTGTTACCAACGAGCTGTTGCGCTCAATCCTCTTGATTCCAATGCTGGGGAAGCTCTTTGCAACTT GCTTGACCAAGGAGGAAAGGATAGTTTGGAGGTGGCAGTGTGCTACGAAGCTTCTCAAAACTCACCCAGGGCTTTCTGGGCTTTCCGTAGATTGGGTTTG CTGCAGCTTCATCAAAACAAATGGCCTGAAGCTGTTCAAAGTCTTCAACATGCCATACGAGGCTATCCCACTTCTCCTCATTTGTGGGAAGCTTTGGGCC TTGCTTATCACCGGCTCGGCAGGTTTACTGCTGCTCTAAAGTCTTATGCCCGAGCCATTGAATTGGATAATACCATGCTCTTTGCTTTCATTCAAAGTGG AAATATCTCCTTAACTCTTGCTTCATTTAGAAAGGGTGTTGAACATTTTCGACAAGCTCTGGAGATTTCACCGCAATCTGTGCCTGCACAATATGGACTT GCTTTGGCACTGCTTGGTTTGGCAAAAGATTGCATTAACCTGGGAGCATATCAGTGGGGGGCTTCATTGTTAGAGGAAGCATCTGAGGTTGCTAGGGCAT GTGCTTTTTTTGTTAGGAATGTCTCATGTATTTGGAAACTGCATGCTGATATCCAGCTTACATATGCAAGATGTTTTCCTTGGATTGAGGATGTCCAAGA ATTGGAGTCCGATAAGGAGGCTTTCAGTGCTTCCATTATTTCTTGGAGGATGACCTGCTTGTTGGCTGCAAGACGTGCAATGTTTTCGTATCAACGAGCC CTGCACTTGTCACCATGGCAAGCAAACATCTATGCTGACATTGCAGTAACTTCAGATCTTATTACTTCATTGAGTGAGAATTGTAAACAAGACTCAAGTG CATGGCTACTGCCAGAGAAGATGGCTGTGGGAGCCTTGCTACTTGAGGGTGACAATTATGAGTTCTGGATGGCTTTGGGATGTTTGTCGCACCATAATGC ACTTAATCATCATGCTTTAATCAGGGGACTGCAATTGAATGTATCTCTAGCTGTTGCTTGGGGATATCTTGGTAAGCTGTATTATAAAATGGGTGAAAAG CAACTGTCAAGGCAGGTATTCGATCGTGCTAGAAGTATTGATCCTGGCCTTGCATTGCCATGGGCAAGCATGTCAGCTGAGTCTTGTATTAGGGAGCTTG AACTAGATGAGGCATTTGAGAGCTGTTCACGAGCTGTGCAGATAATGCCTTTAGCTGAATTCCAAATTGGTCTCACCAAACTTGCTTTGCCAAGTGGCCG TCTGTCATCTTCACAGGTTTTTGGAGCTATTCAACAGGCTGTGCAGCATTCTCCTCACTATCCTGAATCCCATAATTTACATGGGCTGGTTTGTGAGGCT CGAAAAGAGTACAAGTCCGCTGCTGCTTCTTATAGGTTAGCACGTCATGCAATCAACATTGGCTCATGGAATATTGCAGACTCACAAGTGAAGGATATAT CAATCAATTTGGCCAGATCGCTTTCTTTGGCAGGGAATGCTGTTGATGCTTTGCAGGAATGTGAAAATTTGAAAATCCAAGGGGCACTTGACGCAGAAGG CTTACAGGTATATGCTTTCTCATTGTGGCAACTTGGTGAAAATGGTTTGGCTCTCTCTGTAGCTAGAAGTCTTGCTGCAACTCTTTCTTCTATGGAAAAG GCATCTGTTGCCACATCCATATGCTTCATCTGTAGATTGATATACTACATGTGTGGACTGGATGCGGTCATCACTAACATTGTAAAAATGCCAAGGGAGC TATTTCAAAGTTCAAAAGTTTGTTTTGTTATGTTGGCTATCAATGCTCTTGATGGAAATAATCGTCTTGGATTTGTTGTCACAACTAGCCGATATTTTCT CAAATATCATGAAGAAATTGCCAGGATGCACTTTTTAATAGCGCTTGGTAAACTGGTCAAAAATGGGTCTGTTTGCTGTCTTGATGTTCAGAGTGGAGTT GCCTACCTCAAAAAAGCTATGCACATGTTCCCTAACTGTAATTTGATGAGGTGGAGCGGGTACTGATGTGTATAGTAACACAACTCAAGTGTCCTGCCAC CTTATCTTTTCTCATCCTCAGTGTTTATCCCTCTGTCCTCTCCATGAATCCAACAGTTCAGCCTTTCTATGTTGTCACCTCAATCCCAACTCACCATTGC TTGTCACAATGGCAGCGCTGGTTCAAGTTTTGACTGCACCAGTTAGACTAACATTGAAGTTCACTGGGTCCAAAAATACCCCGCACTTTCTTAAAATTTC TTATTTTTTCCCCTATCCATTCAGGCTGGCCTGTTATAATTCCTTCAAATTATGTAATTAACATACAACAACCAAGCCTTAACATACCCTTCCTTAAATT GTATGGAAGAACCTTCTTGGCTATCTCTTGCTATCCAGTAAAGAGTTAAACGATTGTCATGTGGCGATAAGATGCTGTAAACTGGGGCATCTTGATCTTT CTGATGAAGAAGGTTTAAAATCAGCTTTTGATATTCATGGTGCTGGAGCAGTTGCTTGCTATGCCACTAGCAACAGCAGTCCGAAGTTTACTTTTCCAAC TTGTACGATGCAGTGTTCTAGTCATTCTGGAGCTATCAGATACCTGCAGAAATCTTTTCACCAGAAACCTTGGAATCATGATGCCCGGTACTTGATTGTT CTTAATTATCTTCAGAGGGCACGTGAAGAGAGATTTCCTCATCATCTTTGTGTTATACTAAAGCGTCTAACTCATGTTGCCCTCGCAAATGAATTGTATA GCAAGACAGAAATGTTGTATCAATATAGACACTTCCAACTTCTACTTTGTGCCTCTGAGATCAGTTTACAATGTGGGGATCACATTACCTCTATCTCTCA TGCGAAAAAGGCTTCTGAACTTGTGCTTCCTGATGATTACTTATTCTTCGCTCATCTACTACTGTGCCGTGTGTATGCCATGATAGGCGATCATCTAAAT TTTAAGAATGAGTTTGCACAATGCTTGGAGCTTAGGACAGATTGCCATATTGGTTGGATTTGTCTCAAACTAATGGAATGTCGGTATGAACTGCAAATCA GCTCCAATGTCATAGATCTGAACTTTGAAGAATGTGTTCAAAAGGGTGGAAATTCATGGAATATGTGGATGGCTGTATATAACCTAGTGAGAGGTATGAT TTCCTTGCAGAACAGGGATTTATTCTCCGCAGAAGAGTTTATGGGGCAGGCTTGTTCTTTGACAGGTTTTGAGAGCTGCCTCTTTCTATGTCATGGCGTT ATTTGTATGGAGCTTGGCAGGCAGCTCAATGATTCTAAGTTCCTATTACAAGCTGCTATGAGTCTTACCAAAGTTCACGAGCTTTCATTAATTCCCTTGC CTCTTGTCTCTGTATTGGTGGCTCAAGCAGAAGGAAGCCTCGGTTCTAAGGAGAAGTGGAACAGAAATCTTTCGTTTGAATGGGATACTTGGCCACCAGA AATGAGGCCTGCAGAGCTTTACTTTCAAATGCATTTGCTTGCAAGACAGTTGAAAGTTGGGGCCAACTCTACATATAGCATAGTGTCCACTCAGACTCCT CAGAGATGGGTTCTTCGGGCAATTCATGTGAATCCTTCTTGTATGAGATATTGGAAAGTTTTACTGAAGCTTCTGGAGTAGATTTACAAGTGAATGGAAC CTGTTTCAGGATATTGTCTATGTATCACTTCTATTGTCTATTCAGGATGAGAAACGTCTAAGCAAGTTGTTACCAATGTTGTAATTGTAATAGTTAACTA AGGCATGAATCAATTGAAAATAATTTTATAGTGAACAAGAAAGAAAAAGTAAATAATGTGCTTATTTCAAGGGTAAAATTTACTATTTGCTCTTTACAGA GGCACATCAAAATATTTATAATCCTTTTACCTAGAAGAGAGAATTTTGTTATTTATGTGAAATTATGTCACTTTGTATTGCATTTATATTAATTTAAAAT GTGAAATTATGGGCATGGGGTCATAGTTTGAAGCATGATGAAGACGCTAGGTAAATGTAAGAACTAAGAAGTAACATAGATGAGCATGAGAAAGGTACGT GATTCTTGTAAACAATATACATTAATAGTATATGAATTTTAGACAAAATGGTTGTTTGGAGAATCTAAAGGAGAGATATAATGATAAGGATAATTAAGAA AAATAAAATGTGTTATATGAGAAAAGATGTATGTTTATTTTGTGTGGTTGTTGTTGTTGAGTTGTGTAAGTAGG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_35026; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_181179
| Blastp | Tetratricopeptide repeat protein SKI3 from Arabidopsis with 57.74% of identity |
|---|---|
| Blastx | Tetratricopeptide repeat protein SKI3 from Arabidopsis with 57.74% of identity |
| Eggnog | Tetratricopeptide repeat domain 37(ENOG410ZG1H) |
| Kegg | Link to kegg annotations (AT1G76630) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019423132.1) |
| Pfam | Tetratricopeptide repeat (PF13176.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |