Id Trinity | FTRINITY_DN53603_c1_g4_i11 |
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Name Transcript | Ll_transcript_262919 |
Sequence | CCAATTGTTAGGACTTATGCACATTAGGACAACCCAACCCAAAAGACTAGTCTATTATATGGGAGAGCCTCATGACTTAAGTACCACGTTGAGTTTACTA TTCTACTCAATATGGGACTCCTAACATGTTTATGTCAGACATGTATCTCTATTAGACATTCCTAACCATGTTCTAAAACATTTTATATTTTTCTTTTTGT TCTATCCTTATGTCAGTATTGTATCATATATGTGTCCCATTTTGTATCCGTGCTTACTTGTTTACCGTTAATATTTGAGTTACATGGGAAGAATATCATC ATTTTCAGTATGTTCTATGTGAATAACCTTGACAATATACAGTTAGACACTCAACTGTAATTGGAAATGTCTTTAGAATTTGCAGTCTTTGGCACCGATG TTTTGTTGATTTGGAGGTTTGATTTTGTTTTGATGGATTTTTATGTCTGATTTGATGAATTTGTCCGCTGTTCTGACATATAATAGTTAGTAGTTGTTGA TGCATTATTAGGTTGCTGGATCTTATGGACTTCCTCCAACCCCTGCGAGGCGCACTCTTTACATTGTATACCAGACCGCTGTTCCATATATTGCAGAACG AATAAGTTCTAGACTTGCTTCTCGTGGTATTATGCTTGCTGATTCTGAGTCTGCTGAGAGTTACAATGAAAATGACCCCAGGAGCAGTAGTTCTCAGATT TCTAGCTCGAGTCAACTTCCTTCTTCTTCCACATTAGGACAATATATTCCAACTCTAACGAGGTTGAAGGAAAAACTGAGTGGATTTTGGTTGCATACGA TTCAGAGGTGGCCTGCGATGCTCCCTATTGTTCGTGAGTTGCTGCAGTTGCTTCTTCGTGCTAACCTCATGCTGTTCTACTTTGAAGGCCTCTATTATCA TATATCCAAACGTGCTGCGAGCATTCGTTATGTGTTCATTGGAAAAGCATCAAATCAAAGACCAAGATACCAAATACTAGGAGTATTTCTGCTTATTCAA CTTTGTGTAATAGCTGCTGAAGGTTTGCGTCGAAGAAATTTGACTTCAATTACTGGTTCTGTAAACCAAGCATCCTTTGCAACCTACCACAGATCGCCAG GCCATGATTTACCTGTTTTAAACGAAGAAGGTTCTCTGGCATCTCCAGATGCTGATAAAGGAACATTGGTCTCTGAATCTTCATCTCCTGAGGTTCAATT CACCCCTTTTCTCCTTGTAATAATTATATTCAGTGTGCAGTTGTTGCTTTCATGGAAGTCGATATGTGATATATGTTTTACTTGATTAGAAAATTCTAGG ATCTTCAGTGGGATAAACATATTGCTTTAAACCTATGCGCCATATGCGGTCGTCTTGATATGACGGGTGAAAATGCCGATATTTAGGCTTTGGCAGACAA TGACTAGATTGGAAAAAATCTGATGATTGTATCTCTTTTTTATTTATATTTTAACAAAAGGGGTATAACAAAGTGGAAATGAGAAGATAAAGTATACAGT TAGATAATACTAAGATATGATTATATTGTGTTTGGTCCTCGGCGAGAATTTGAACTATCTGGTTTTTGTGATTACATTGCTGGTGTATGTACTTCTTATG TCTATAACTGGTGTTGGTCCTTAATACGATTAGGCAGATCCATTATGTCATCTCTAAGAATGTCAACTTGTCAAGTGTGAAATGCTTTTTCTATTTGCAG TACCATGCAATTGGCGGGGCTAGCAAATGCACGCTATGCCTGAGTAATCGTCAAAATCCAACGGCCACTTCATGCGGCCATGTATTCTGCTGGAGCTGTA TCGCAGAATGGTGCAATGAAAAGCCAGAATGCCCTCTTTGCCGCACACCGATAACACACTCAAGTCTAGTTTGTGTGTATCATTCGGACTTCTAGAATCT GCTTCTTGTCAGCTGCAATCATTTGTGCATGAATATAAAGATCGCATTGAAGACACCATTTTCCTTATCTTGAATGAATGAAATAGCTTCTGGCAATGGT GTTTGCAGCTTCATCCTTGCATCCACAACTGCCTAACTCATGAATCCTTTTTCATTTATTTAACAAAAGTTTAGATTAGGCCTTTAACACTGGAATAAGA GCTTTTCTTTTCTTGATAGCTTTTTATTTTATAACTTAGACCTCTCATCCAAAAAAAAAACACTCTTTGAAATTTATGTTGTGAGTACAATGCTTTGGTT GTCTTCCGATTAGAGTCAGAAAAAATGGGTTGTCAGATTACGCCGGCAAAGCGCCGGGCTTAGTCAATAGTATTCTAG BLAST |
Tissue | flowers |
Gene name | LI_gene_35178; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_262919
Blastp | Peroxisome biogenesis factor 10 from Arabidopsis with 58.15% of identity |
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Blastx | Peroxisome biogenesis factor 10 from Arabidopsis with 51.47% of identity |
Eggnog | Peroxisomal biogenesis factor 10(COG5574) |
Kegg | Link to kegg annotations (AT2G26350) |
CantataDB | Link to cantataDB annotations (CNT0002111) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019422334.1) |
Pfam | Pex2 / Pex12 amino terminal region (PF04757.13) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |