Id Trinity | FTRINITY_DN53620_c0_g3_i7 |
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Name Transcript | Ll_transcript_264032 |
Sequence | ACTCACGAGTAGCAGAGATGGAATGTGTTATCCCAGCCATGTCTCTAAGTCTATATCAAACCAATCATTATTAAGAAAAAATATATAAAATCGTGAGTAT TTAATTTTTTAAATGATATAACATCAATATAATTGGTTTGGGACAGACTTTAGTACAAACATGTGATCAACATATCATTTTCTTCCTCATAAACCTTCTC ACCACAAAAACATTCCTTTTCCTACTCCTGCAACTTGTTTCAAGGAAAAAACAAATTCATCATTTCTCTCTCACTGTCTCTCTTTCAACCTCATACTTTG ATCCTCTTCATCTTCATCCATCCATGGATATTGCTCAGTGGTCACAGGAAATGGTGATGAAGCCAATAGAAGACATAGTAGTGACAAAGCCTGCAACAAC ACTGGAAAGGAAGCCAAGGCCACAAAAAGAACAAGCCCTAAACTGTCCAAGGTGTCATTCAACCAACACAAAGTTCTGTTACTACAACAACTACAGCCTC ACCCAGCCAAGATATTTCTGCAAGACCTGTAGAAGGTACTGGACTGAAGGTGGGACCCTCAGAAACATCCCTGTAGGAGGTTTATCAAAGAAGAACAAGA GATCATCTTCTAATTCTTCTTGTTCCTCAACTCCTCCCATTAAGAAGGTTCCAGATCTGCTCACACCTCAAAACCCTAAGGTTCATGATGGCCAAGATCT AAATTTGTCTTTCAGAAACATAAATGAATTGGTTCAACAAAATAGCAGCAATGTTTCTGGCTCAGCATCTTCTTGTACTACTACTACTACTACTAACCTT TCAGCCTTGGAGCTTTTGACTGGGATCACTCCAGGTTCAATGGGTGTGATGAGTTCTTTCATGTCTATGCATGTTCCAGGAGATCCAAATTCAGTTTACA CTTGTGGGTTTCCTCTTCAAGATTTTAAGTCAAGTTTGAGTTTCTCTTTGGATGGGATTGGAAATTTTCATGGTAATAATGTTCAAGAAACAAGTGGGAG GCTTTTGTTTCCATTTGAGGATTTGAAACAGGTTGCTAGCACCAACACTACAATAATAGATCACAACAATAATGAGCAACAACATGAGGATTCATCAAAT GGTGGGTATTCGACTGGAATATTAGGAGGAGGATCATGGTAAATTGGTAATAATTAAAGCATGCCATAAAAATTTAATAATTTTCTTCCTAGTTAACTTT TCAACTTTAATTTGAGTTGTGATGAGTTCCTTTGGATTTCTTTATAACTGGGGACCACATTTTCCTACAAATTTATAATCAACAACATGGGGATTCATCA ATTCCTCTTCTCTTCATAGCTAAGGTGCATGGGATCTTGAAATGAAGCTTATTTTAGGCATGCTTCAGTATTCAGAAATCAAAGAAAGGGCTACATTACA TTATGTATAAAGATATAAGAGATCAAGATTAGCCCCTTTCTTGGGTTAACAACCATAGTCTAGAAGGGGTGGTAGTTTAGGACTGAGATCACCTATCCCA AATAGTATTTTACTCTCTGTCTCAAGCCAATCAGAGTGTTATTTTTAATTTTTAAACTTTTTCTTTTATCGTATCAATATGTAATGTCTTGAGACAAAGT ATGAGACAATATTAGGAACATATGACTCATCTAGCAGTTTAAGCATAATTCTCTCTTATATTTCATGTAATTTATTTATGGCAGAAGCAGGTTAGCCCAC TATTACATTATGCTATGATCAACTTGGTTTGATTTTTTTGGTCAGCCAATTCGGAAAATGTATAATGTACAAGAACAAAACTATATAAAATATATATTAT TTATATTAGCTGAGATATGTTATGATTGTGAATATTAAAAATGTTTGGTGTGAATATCTATGTAATGCTTTTCCTTGCTTCATGTTACTTGTTTTCTATC TTTCTGTGCTGTGTGCTGTTTAAATACATTCAGGTTTTGAGGTGTCAGTAGCAGCAAGATTCATCTATCCACATTAAATCAGGTCACCATGAAGGTATAG AAGAGAATAAAAGCCAGGCTATAATTGAGGTGTTTAGAAGAGACATGATTCTTCAATATGAGTTGCATAATCAAGCTGGTTTTGGCACAATTTTACAGCA TGGATTGAGCATCATGGAATTGTTTGATAAAGGAGAATTAGTTTATATTAAGCCTTCTAGATTGATATATAAACATGTGTTAAATATGGTAGTTGTGTTA GTTAGTTTGTTAGGCTTGTGCTTATTATTTTTCTGTGTGAAGATTGAGGATTATGACATATAAATAAGCCTTCAATCATCACTTGTATAGTGCATACTTT GTATAACATTTTT BLAST |
Tissue | flowers |
Gene name | LI_gene_35320; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_264032
Blastp | Dof zinc finger protein DOF4.6 from Arabidopsis with 43.23% of identity |
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Blastx | Dof zinc finger protein DOF1.8 from Arabidopsis with 67.71% of identity |
Eggnog | Zinc finger protein(ENOG410YH6N) |
Kegg | Link to kegg annotations (AT4G24060) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019427056.1) |
Pfam | Dof domain, zinc finger (PF02701.14) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |