Id Trinity | FTRINITY_DN53626_c0_g1_i5 |
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Name Transcript | Ll_transcript_264650 |
Sequence | GGGATTGATGATGTTTTTACTTCTTCTAGGGGATCCACTAAGACTCTTGGAAATTTTGTTAAGGTTTGGTTCTTCATAATTTCCCAGTTTTGTACTGTTA ATTTTATTTGGTATTATGCTTAATTGTTTCATTTATATTCATTTTTTTGTGTGATAATTGTTTATTGCTCTCTGTTGATTAATTTTCTCTGAGCTTTAGT TGATTCTATTGATTTATATAAATTATTCTCAATGTATTATCATGTCTAGTTTTATAAACTTTCTATTGTTACATAAGTTTTTTTTGTATTTTAGACAATG TATCCGTTTTTTATTGCCTTGTGCAGATTCAATTCTCTATAATCTTGTTCAAGTAGCCTATTTTGTTAATTCATATGATTTTTTGAGGAATTAAGAATAT GTTGTGTCTACAATCCTTGAAGGTTCCCTAAACAATGCGTTACTTTTTTATTTATCATGTTGAAGGTTTTTGTAGTATGTTGTGTCTGAAATCTTTGAAG GTTTTTGTATCCTAGACAATGCATCACTTTTTTAATGATCATGTTGCATTCTTCTTCAAATGTGTGTTTGTGGCTTTTGATTTGGTGAAGAATATCCATT CAGTTTTAAGTGTCTACTCAATGATTGTTGGATATACATGGATTACATGTGTTGTGCTATCTATTTATGTGCAATGTCTTGTTTTTTGTAGGCCACCTTT GACTGTCTTCTGAAAACCTACGGTTTCCTAACACCCGAGTTCTGGAAGGAGACTCGTTTCTCTAAATCTCCATTCCAAGAGTACACAGATCTTTTGGCAA GGCCTACAACAAAGGCTTTGATCCTTGAGCAAGAGGAAAAGGCTGTGGAAGCTTGAGTTAGCAGTTTTGATGTAATGAGTTGATTGTTTGTCTTAAGCAC TATGCTAGAAACTGGTAGTTAAATGTTTTGTTGGGTATGTCTCTCCTTCATAACTTAATGGATTTGGTTATTATCAAGTTTTCTTGATTGAATTTTCTGT TTCAAATACCATAAATTCCTATATTAAGTATTGTGTTATTTAAAACGGATGTTTTCTGTTTCAAAAACCCATAAATTTCATAGATTTCTGATTGTTTTAC ATGATGTGTGTTGCATCCAATATGTTTCATGTGATATTCGTGGTATTGTTTGAGAATTGAAGAATTATGTTTTTTTGTAAATCACATGGAGTAATGTGGT TAGTAATTTAGTTAAATAGCCCACAATATTACATGTAAATATGTGGCGGTAACAACTATTTATGTTCTTGAATAAAAATTAGACGCATTGTTCTATTTCT CACATGTTTGGTTATTTTGGCATCTGCATGTGATAGGAACTCGATTTGTCAAATTGTCTTTGGGATAGAGTATTGGAGAATTAATTTCACTGAGATGATT AATGTGGAAAGGGTTTGTATGTGAATTGTGAACCAATGAGAGATGGTGAAAGAGGAAGTGTGGAATCGTCAGTGAGAAATAGGAACTGAGTGTATTGAGA AATTTCTTATGTAAAGTTAGGTTCTAGCAGTTTGTGAAACTCCTTACCTTGAACCAAAACAATCATACTCTGTTGTCTGTTCTCAATAAAAACCTAAATC AAAACGTAGAACCAACTAACTAATTGCATTTCTGGTTCGGTTCAATTATGTTGATTTTGTTCCAATCACTTACCCAAATGATAATCATGCCCTAATGGAT GAAAAGCGGACAAAATATTATCCCCCAATTGTGATGTGATTAGTAGAGTGGAGCAAGAAACAGTCGCATATCAGCAAGAGATGTAAAATGTTATTGTCTT CTGTCTTGAGTAGAAGAGAAACATGGGATCACAACATGCATGGCCAATAATAAGTAGACTAATTGTTAGTGGTACATTGCCAAACAATTCCAAAGTAGGA AGCCCCCTGTGAGACCCTCTTATTCAACACAACTTATTATTAATAAAAATATGTGTTCCTTAAGATGCCTATTGTTGAGGATCTTTTGTCAC BLAST |
Tissue | flowers |
Gene name | LI_gene_35388; |
Additional information | - |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_264650
Blastp | - |
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Blastx | 40S ribosomal protein S2-3 from Arabidopsis with 62.71% of identity |
Eggnog | Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body (By similarity)(COG0098) |
Kegg | Link to kegg annotations (AT2G41840) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019424308.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |