Id Trinity | FTRINITY_DN53629_c4_g2_i1 |
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Name Transcript | Ll_transcript_263337 |
Sequence | CCACTTCCTCCACCATCACCCCCACCCCCACCACCTATTCCTCAGTCAAACAGCGCCGTGTTATCTGATTCGCAGATGCAAAATCCAGGTAGATAATACT TGAATCTGGATAACATTGAAAAATATTATTTTTGTCATCTGATATGGTTAAACTCAACAACAACAATAACCTTTTTGTTGATGTTGTTTCTCTCTCTGTA ATCTTGGACCTTACTAGTTTTTGTCTGGTTTATTCTTTGTTGCCATATGTGTATATTCATGAATAACATAACAAGAGAGTAAGTGCTATGAGATTTAGAT GGCCAATTAAGCAATAATAATAATAAATAAAACACCTAAAAAGTGCTATTTGGTATACTGTGGGAGCTAAATTGTGCAATTTTGTTGACAAAGAAACTCA AAAGATTCAAAAGCTAAAAAAAGAGAAAATATTTGTTTTTTGGGGGTAAGGGGGAGTGGATTTGAGAAAGGAGACTATTGTATTATTTGTTCTTTTCTCA TAAACTTTAATATAAAAGAGAGGCCCAAACTTTACATTTCTACATGCATCCTTACTGGCCACTTTTGCTCTTCTCCCCTTCTCTTTCTCCACCATATTAT CATTTGATGTCATATGTATTAAAATTACTCCTGCTTCTTTTTCTCTCTTGTTTTTATTTTTTTAGAGTTGCCAGAAAATAGTCCACAAATCGTAGAGGAA CTACAGGCCAACAATGCTCTAAACGGGAGCTGTAGCACCAGCACCAACACAACAAGCAATGGAGTTAGTGTATTTGCAAGCTTGTTTGCTTCATCAACCA CATCTGAAAACCTGCAATCTCAAACACCTGCATTTACTGACCTAATCAGGGCCATGGGACGCCCAGATCATCCGGTGGACATCCCAGGTCCGTCATTTTC TGATCCCATCTCTCTATGCCTTGGCTCGTCAATGTTTGCAACAGGAGGGCAGGAGCGCCGACAGTATGCCCCGCCACCACAGCCAGCTATGTCTGCCACT GCTTTACTACAAAAAGCTGCTCAGATGGGCGCAGCTGCAACGAATGCCTCACTACTTCGTGGTTTAGGCATAGTTTCATCTTCTGCTTCAACTGCACCAA CTCAGCAAGATAGTTTGCAATGGGGCCAGCGACAAGTTGAACCGGACAGTGCCTCTATTTCCCCAGGACTTGGACTTGGGCTTCCTTGTGACAGTGGCTC TGGACTGAAGGAATTAATGTTAGGGGCTCCTTCCTTGTTCGGGCCAAAGCAGACCACTCTTGATTTTCTTGGATTGGGGATGGTTGCTGGTGGCACTCCT GGCGGAGGCTTATCGGCACTGATCACATCAATTGGTGGCAGTCTGGATGTTACTGCAGGGGCGGCATCCTTTGGTAATGGAGAGTTCACAGGCGAAGATA TTGGGAGGAATTCATAATATTTTGGTTTCAAGAACTGTAACCTTCAGGGCCAGAAGTTGTGGTTGTACAGAGTTAATATGGTCTTTGTTCAATGTGAAGC TGCAATGCACATGATATTTTCCTATTTAACAGTGCAATTTACAATGCGCAAATGGGTTATTTTAGATTATCTATGCCCCTACCGTGGGCATAAGAACTGT ATATTATAGAGCCTTCCTTCCAAGTAGTGGCACAAGTTTCAATGTTATACTTGCACTGGACCATTGCATTTGGTGAGTTGAATTTTGCTGTTGTTGCAAA AGGTTGGGATTTGATGTTTTTATGGGCATCCTTGGTTAGATAGTGCCAATGGCCCATTTTATTTAAGGAGTAAATCTCGATCTTTTGCTTCTTGGGCATA TACAGTTGTGTTCAAGTTGTGAATTCTGATGTTGGATGATTTGGTTGGTCCATAGCCATAAATCAGGAAACTTTTGATGTTATTTTCTTAGACTGTTGAG TTATTGTGACAATGTGGTATCTAGCAGTAGATGGTTTAATCGAATGAATTTATAGATTCTTTGCTGGTTTTAAGTTATATTTGAATATAAAAAAAATAAA ATAAAGAAAATTTATTTTCTCCTTATATTCCTTTGATTACAAGTTTACAACCATTCTTGCAAGGTTGTAATGGTGTAATAATACCTTGCAATAGAATCAA TGTCCCTCTAT BLAST |
Tissue | flowers |
Gene name | LI_gene_35416; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_263337
Blastp | Protein indeterminate-domain 1 from Arabidopsis with 55.56% of identity |
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Blastx | Protein indeterminate-domain 1 from Arabidopsis with 50% of identity |
Eggnog | Zinc finger protein(COG5048) |
Kegg | Link to kegg annotations (AT5G66730) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019444753.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |