| Id Trinity | FTRINITY_DN53629_c4_g2_i2 |
|---|---|
| Name Transcript | Ll_transcript_263342 |
| Sequence | TTTATATTTGCCTGAAGGCTGCGACTTTTCCCATTTATTTATTACTTCATTTATCACATTAAAAAATGTTAGTAAAGCAACTTTAGAAACAAAAGGAGAT TGAGGAGTTTCAAGGCCTTATCTTTCTCATTCAGGCGCCGCCACCTCATCACACCCTCTCAATTCTTCCGCAAAATTCTTTGGGTCTAGGTAGATTTTGT TCTAAAATAGATTAAAGCTGTTATTTTTTTTGTTCCTGTGTTTCTAATGTTGGATCAAAGTTCCCTTGCCGGCAAGAGTTTTTTGATGTATTTTGTGGCA GTTGTTTAAGGTACTGGCTTGTTGGGGTTAATCATTTTAGTTCTTGGGTTAAAGTTAATTTTGGTCAGAGACCCCATCATCAGAGCTGGTAGGTAGTGGT GGGTAAATGAGAAAAAAGAGGTGACCCAACAAAAAAAAGTATTTTTTTTCTGCAGTTTGACTGGTAGATATAGAGAGGGAAAGTGTGAGGACTTGAGAAG AAGACAAGAAAGAAACAAATTCTAGAAAACTCCAAAAAAAGAAGAAGTGAAATTACAAAGAGAAAATAAAAATTCATCACAAGAACCTGGTTTGGAATCA AGAGGGTGAATGCCCTGAAATTTCTTCACTCTGATTTTGAAGAAATTGTAAGGTCCACATGCCGCTTGATTTAGATAATGTTTCCACAGTCTCAGGGGAA GCTAGTGTTTCTTCCTCTGGCAATCAGACAGTACCTTCAAAAACTAAGAAAAAACGAAATCTTCCAGGAATGCCAGGTACTAAGAAAAATTCATTATCCA TCTTCATCTTTGTAATTTTTTTAATTCAATGATTATGTTTGAAAGTTTGTATTTTTGGGTTTTTCAGATCCAGATGCAGAGGTGATTGCTCTGTCTCCAA AGACCCTAATGGCCACAAACAGATTCGTATGTGAAATCTGCAACAAAGGATTTCAAAGGGATCAGAATCTTCAGCTTCACAGAAGGGGTCATAATCTGCC ATGGAAGCTTAGGCAGAGGTCAAGCAAGGAAGTGAGGAAAAGGGTTTATGTTTGTCCAGAACCAACTTGTGTTCACCATGATCCTTCAAGAGCTCTGGGG GATCTCACTGGGATAAAGAAGCACTTTTGCAGAAAGCACGGTGAGAAGAAGTGGAAATGTGAAAAGTGCTCCAAGAAATATGCTGTTCAATCAGATTGGA AAGCTCACTCTAAGATTTGTGGTACCAGAGAGTACAAGTGTGATTGTGGGACTGTGTTTTCAAGGAGAGATAGCTTCATCACGCATAGGGCTTTCTGTGA TGCCTTAGCAGAAGAGAGTGCAAGATCTCAGCCTCAGAGTCAAACTACACAGACTCCGAGTGCCGTAAAGGCTAATTCTGACTCAGATTCCAAACCTGTA ACCGGAGATGATTCATCACCCATGGAGGTGCCACCACTTCCTCCACCATCACCCCCACCCCCACCACCTATTCCTCAGTCAAACAGCGCCGTGTTATCTG ATTCGCAGATGCAAAATCCAGAGTTGCCAGAAAATAGTCCACAAATCGTAGAGGAACTACAGGCCAACAATGCTCTAAACGGGAGCTGTAGCACCAGCAC CAACACAACAAGCAATGGAGTTAGTGTATTTGCAAGCTTGTTTGCTTCATCAACCACATCTGAAAACCTGCAATCTCAAACACCTGCATTTACTGACCTA ATCAGGGCCATGGGACGCCCAGATCATCCGGTGGACATCCCAGGTCCGTCATTTTCTGATCCCATCTCTCTATGCCTTGGCTCGTCAATGTTTGCAACAG GAGGGCAGGAGCGCCGACAGTATGCCCCGCCACCACAGCCAGCTATGTCTGCCACTGCTTTACTACAAAAAGCTGCTCAGATGGGCGCAGCTGCAACGAA TGCCTCACTACTTCGTGGTTTAGGCATAGTTTCATCTTCTGCTTCAACTGCACCAACTCAGCAAGATAGTTTGCAATGGGGCCAGCGACAAGTTGAACCG GACAGTGCCTCTATTTCCCCAGGACTTGGACTTGGGCTTCCTTGTGACAGTGGCTCTGGACTGAAGGAATTAATGTTAGGGGCTCCTTCCTTGTTCGGGC CAAAGCAGACCACTCTTGATTTTCTTGGATTGGGGATGGTTGCTGGTGGCACTCCTGGCGGAGGCTTATCGGCACTGATCACATCAATTGGTGGCAGTCT GGATGTTACTGCAGGGGCGGCATCCTTTGGTAATGGAGAGTTCACAGGCGAAGATATTGGGAGGAATTCATAATATTTTGGTTTCAAGAACTGTAACCTT CAGGGCCAGAAGTTGTGGTTGTACAGAGTTAATATGGTCTTTGTTCAATGTGAAGCTGCAATGCACATGATATTTTCCTATTTAACAGTGCAATTTACAA TGCGCAAATGGGTTATTTTAGATTATCTATGCCCCTACCGTGGGCATAAGAACTGTATATTATAGAGCCTTCCTTCCAAGTAGTGGCACAAGTTTCAATG TTATACTTGCACTGGACCATTGCATTTGGTGAGTTGAATTTTGCTGTTGTTGCAAAAGGTTGGGATTTGATGTTTTTATGGGCATCCTTGGTTAGATAGT GCCAATGGCCCATTTTATTTAAGGAGTAAATCTCGATCTTTTGCTTCTTGGGCATATACAGTTGTGTTCAAGTTGTGAATTCTGATGTTGGATGATTTGG TTGGTCCATAGCCATAAATCAGGAAACTTTTGATGTTATTTTCTTAGACTGTTGAGTTATTGTGACAATGTGGTATCTAGCAGTAGATGGTTTAATCGAA TGAATTTATAGATTCTTTGCTGGTTTTAAGTTATATTTGAATATAAAAAAAATAAAATAAAGAAAATTTATTTTCTCCTTATATTCCTTTGATTACAAGT TTACAACCATTCTTGCAAGGTTGTAATGGTGTAATAATACCTTGCAATAGAATCAATGTCCCTCTAT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_35416; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_263342
| Blastp | Protein indeterminate-domain 1 from Arabidopsis with 57.29% of identity |
|---|---|
| Blastx | Protein indeterminate-domain 1 from Arabidopsis with 58.37% of identity |
| Eggnog | Zinc finger protein(COG5048) |
| Kegg | Link to kegg annotations (AT5G66730) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019444753.1) |
| Pfam | Zinc finger, C2H2 type (PF00096.25) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |