| Id Trinity | FTRINITY_DN53632_c0_g1_i11 |
|---|---|
| Name Transcript | Ll_transcript_263033 |
| Sequence | ACTCTTTTGAGCCACCTGCCCCTTTCTTATTCTTCATCCCCATCAAAGGTATAACCCACTATCTTTACTTTCCAAATTTCAATTCTTTTACAATTAGGTC TCAATTGCCCCAACTTAATTCAAACTTTTATTTCACCCCCGCTTTCATTTTTTAATCTTTGCGCCTCTATTTGGTTTTGATTCTCAAGCTGCTGTTGTGT ATATATATATATAATGTTTACAGAGGGGCTATCTAGTTTGTTTTTTTCTTCAGTTTTTCCTTTTTAATCTTAGTATTTTACGAATTAAACTGTTTCTTTC TGTGGTTAAGAATTCAGGGCTAACTAAGATTTTTGTGTATAGGTTGTTTTGAACTTTTGATGCTAAGTTAGATGGCACTGCAAGGGAAACAATAAAAATG GAATTTTGAGTATTGAATAGGTTGATTCATGATGATTTTGTTTCAGTTTAGCTATTAACACAACAGTAGTTGATTTGTGCCGAAAACTTCTACACACAAT CTTCCACCAGATGTTTAGACATAATCAGATATGCAGGAAGCTAAGATTATCAAAGTCGATTTTCACCACTTCATCTGTATAGACGATATTGAATTGTGTT CAAGTCTGCAATAGTATAAAATATTGTTTCTACACGTCCTTCGGCTGCTTGTGAGACCCCTTGGCTATCCATTTGGATACTATGATGGCTCTTCCCGGCT CTTTGCAGATGTCCCATGGACTGGGACTTTGCTATAATATGGGCTGCAATAAACACCCGGGGGCAACAGGAAGAGGAAAGATATATTTATTGAGTGCAGG TCCTTCATATCCTGTTTCGTTCATGAAACAGGGTTGCTGGGGTTTCCAACACTTCCATCAAATAGGCAGGCCGACACGTACATTATCTTATAAATCTCGC TCTTTTAGGTGCCATTCTTTTTTAGTGCCAGGCCAACCAAGTGAGCTACCTGTTGTCAAGGTGGCTGCTACCATGTTGGTGAGGTCCTATAATACGCTAC AAAGCAGTCCTGTCGTAGTAAAGTTGATTCCTGCAGTTGGTATTATCATTTTTGCACTGTGGGGTTTAGGCCCATTTATGTGTCAGACAAGGAAACTTTT TTTTCAGAGGAGTGATAATGGTTGGAAGAAGAGTACCACACATTATATAGTAACTTCTTACATTCGGCCATTACTGTTATGGACTGGAGCAATACTTATT TGCAGAGCATTGGAGCCAGTAGTTCTACCTACAGAAACTGGCCAGGTTGTTAAGGAAAGGCTTTTGCACTTTGTAAGATCATTGTCAACTGTACTGGCCT TCGCCTATTGTTTATCAAGGTAAGCCTATTTCCTTGCCTTCACATGATCTCTAGAAACTGGTCAGGGTGTTGGTCTCTTGAGTTAATGATGCACTTAATA ACCTCCATTTGAAATAATTTGTGCTTAAACTCTTGGTTTTTCTTCCTTTTTTATTAGAGAATTCAACTATCATCACAAACTGTGATTCCTTGAATATTTA GTTTCACTTTTTCTTATATTCTTTATTGGACCCTTCACCTGTATTTTTTATGAAACAACATTTTTGTAGCTAGCTTGAGTACTTCAATCTGATTTTTAAT TCCTTACAGTGATTACTAAGTTTTACTTCCATATGTGCAATACTCTTCTGCAGTGTGATTCAACAAGCACAGAAATTCTTAATGGATAACACTGATGCAA GTGAGACAAGAAATGTATGTATGTTTTCTTTATGTAACGGAAACTAACATTCTCTTCAAAAAAAGAAACTACTGTTATAGTCTAGTTTGAAGTTCAAACA TGAAAAATATACTATCAATTCCATTTATTACCCTTCCACTGTCATAAATTTAATTGCTAGAATGTCTCAGTTAAAGTTTGATATTCGGACCAATTAGCTG GCAATATTGGGCAAAATGGCCAAGTAGATGGTGTGTAATTTTTCAGCTTTTGGATAACAATTTCTCCTTATCAATCTACTAGGTCAATTTTTATTTGCAG GAAATCTTTTGAACTGGTAGTACTTGAGTACACGAGGGCTATATAATTTGCATGTTTATTGGCTAAAGGCATTCATTATGGTCGTGCATGTATTTATATA ATACTCATTTATGGAAGACACATAGCTTGGCAACTGCAATGTAGTGAAGAGAATACTTATGGGATTCCAATTTGCAGGCAAAGCTGTTTACTCTGCAGTA TGGATTGCTGCTTTTTCACTGTTCATGGAATTGCTGGGCTTCTCTACCCAGAAATGGGTGACTGCAGGAGGTCTTGGGACAGTTCTGTTGACTCTCGCTG GTCGTGAGATATTTACAAATTTCCTTTCGAGTGCGATGATTCATGCAACTCGACCTTTTGTGGTTAATGAATGGATTCAAACAAAGATCGAAGGATATGA GGTTTCCGGTACTGTTGAGCATGTTGGGTGGTGGTCACCAACAATTATAAGAGGTGAAGACCGTGAAGCTATCCATATTCCAAACCACAAATTTACAGTT AATGTTGTACGAAACCTCAGCCAGAAAACACATTGGCGGGTCAAAACCCACTTAGCCATTAGTCATTTGGATGTAAATAAGATTAATAACATAGTTGCTG ACATGCGGAAAGTATTATCCAAAAATCCTCAAGTTGAGCAGCAGAGGTTGCATAGGAGAGTATTTTTGGAAAACATAAATCCTGAAAATCAGGCTCTTTT GATTCTGGTGTCTTGTTTTGTCAAGACCTCACATATTGAAGAATATTTGTGTGTTAAGGAGGCTATACTATTGGATCTTCTCAGAGTTATTGGACATCAT GGAGCCCGACTTGCAACACCAATTCGTACCTTGCAGAAAACATACCGTGGTGCTGCTGACTTGGAGAACATACCATTTGCAGATTCCACATTCAGTGGTA ATGGACCAGTATCTAACCGGCCATTATTAATGATTGAATCCGCTTACAAGATCAGTGCAGATGATAAGATGAAAAGTCGGTCAGCACGCCCAGCTGGTGA CCAAGATAACAAAACAACTGTTCGAACCAAACCTGACAGCAAGACAGACACCAAGGTTAGTGACTCTGAGGTGGGCATGCCAGAAGAAATGTCCTTCTCT CAGAAAGACATCAATGTCAAACAATCTAAGAGTCAGACAACTAACAATGTCAATCCAAACATTGACACTAACAACATCGTTTCCTCGTCGTTGACGAGCA CTGATGACGGTGGACTTCCTACGATCATGTCAACAAAACAACAAGGGGAAAAGAAACCAGCTTCACAGTCTCATGCTTCCAACAGGCCTGTTCTTGAAGA GAATATAGTGCTAGGTGTTGCATTGGATGGATCAAAGAGGACCCTTCCTATTGATGAAGGGATTGATAATGCTGCTACAACTCGCGAGGCAAAGGAAATG GCTGCATGTCAAGGTGGAAATGGATCTCCAAAGGGTACAGATGGGAATGACAAGATTGCAATTGCTCCAACCTCAAAGTGATGTTGTAATCACTAACGAG TGAGTTTAATTAGTTAGTAATTTGAAGGTTGTGTTCCAGAATCCACACCCATGATGTTGTATATATTATAACTTCCTTTGTCATACACCATTCATTACGC CCTTCTTACAACCATATTGTTTCATTAATTTGGTTGTGTTCATTATAACTTCCTT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_35431; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_263033
| Blastp | Mechanosensitive ion channel protein 2, chloroplastic from Arabidopsis with 65.75% of identity |
|---|---|
| Blastx | Mechanosensitive ion channel protein 2, chloroplastic from Arabidopsis with 65.06% of identity |
| Eggnog | Mechanosensitive ion channel(COG0668) |
| Kegg | Link to kegg annotations (AT5G10490) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019421399.1) |
| Pfam | Mechanosensitive ion channel (PF00924.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |