| Id Trinity | FTRINITY_DN53634_c1_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_263413 |
| Sequence | TGAAACATTAAAACTAAGATTATTACTATCCTAAAACCTCAACATTGCAGGGTTTTTGAGCTGTAAAATAAAATGATAGCTGCTTCCACCCTACACATAC AATTGCATCATCAAACCCACGACATGGTTTAAGCCTTCACACAATTCCCCTATACCTATATTATTTATTCCCTTCTCTATGAATTTTGAAGCATATTTTT CTCTATATTTTCATTTGTTGCCGCTGCTATTGGTTACAATTTGATGTGCAACACCAGCTCCCTCAACAAGGGGTTTTATTCTTTCTTCCCTTTCCACAAT AAACCCTTTATTTCTCAACATACTCACTTAAACATTTCCACAAACATGTGGTGCACCATTGCTAAACAAGCTGTTTCCACCACGTTTCGTGGCTTCTACC TTCGCCTGCGTCCGAGCAGGCCTCCCAATCTTTCTGGAGTTTATTGTTTCCAACAAAAAAGTGAAACTTTATACCAAGGTGATGGTGGGTACTTCAAATT TAGTGTTAAAGGTTTTGCTAGTGTTGCGGAGGTGGTTTCTTCTTCTACTGAGGCTGAGGAAGACGTTGCTCCGGATGATGAGATTCAAGAATTGCTGGAT GACATGAGGAAAGAGGAGAGGAAGAAGAAGAAGGGGGAGGTTGGGTTGAGCTGGAGGAGTCAGTTGAATTCCATGAGGGGAATGAGTCAGTCGAGGTACC ACGAACTTAGGAGAAGGCAGGTGAAGATTGAGACCGAGGCGTGGGAAGAGGCGGCGAAAGAGTATAGGGAGCTCTTGATGGACATGTGTGAGCAGAAGCT GGCACCGAATCTGCCATACATGAAGTCACTGTTTCTTGGTTGGTTCGAGCCTTTATGTGATGCTATTGAAAAGGAGCAAGAGTTGTTCCGGACTGGGAAG CTTAGGACGGTGTATGGGCCTTACTTTGGCCAGTTGCCGGCCGATAAGATGGCTGTTATCACAATGCATAAGTTGATGGGGTTGTTAATGACTGGAAACG ACCACGGCACTACTAGGGTTGTGCAGGCTGTCCTCAGCATTGGTGATGCTGTTGAACAGGAGGTTAAGATACACAAGTTCCTGGAGAAAACTAAGAAGAA AAAGGATGGTAAAGACAAGAAAAAGGATGTGGCTGAGTCTGTCACTGCCGTCAAGGAAGAGGAAAAACTGCGGAAAAAAGTAATGGATTTGATGAAGAAG CAAAAGCTTGTCGCAGTGAGGGGGATAGTGAAGGGCCAGGATGATTCAAAACCATGGGGACCAGTCATTAAGACAAAGGTAGGAAGCCATTTAATTGAGC TTTTGATGCAGACAGCATATATACAACCGCCATCAGATCAAATAGTTGATTGTGCACCTGATATTCGACCTGCATTTATGCATTCATTTGTAACAGTGAC AAGAGAGGCACAGAAAACAAGCAAACGATACGGTGTTATTCAATGTGATCCTCTAGTTCTTAAAGGCCTTGACAAAACTGCAAAGAATATGGTCATTCCT TATATGCCTATGTTGGTTCCACCCGTCAACTGGACAGGTTATGACAAAGGTGGGCACTTGTTCTTACCCTCCTATGTCATGCGTACTCATGGAGTCAGGC AACAACGTGAGGCTGTGAAGAAGAGCCCTAGGAAGCAACTAGAGCCTGTATTTGAGGCTCTGGATACTCTTGGGAATACAAAATGGAGGGTAAATAAGAA GGTGCTGAGTGTTATAGACAGGATATGGGCTAGTGGAGGTCGTCTTGCTGATCTGGTGGATCGTGATGACGTTCCTTGTCCCGAGGAGCCAGATACTGAT GATGAAACACAAATAAAGAAATGGAAATGGAAAGTCAAATCTGTGAGGAAAGAAAACAGAGAGAGATATGCACAACGTTGTGACATAGAACTTAAACTTG CTGTAGCACGAAAAATGAAGGATGAAGATGGTTTCTACTACCCACACAACCTTGATTTCCGAGGACGTGCTTATCCCATGCATCCACATTTGAACCACCT AGGTTCAGATGTATGCCGGGGTATATTGGAATTTTCAGAGGGACGCCCTCTTGGGAAGTCTGGTCTACAATGGCTAAAGATACATTTGGCAAATCTCTAT GCTAACGGTGTTGATAAACTATCTCATGAGGGTCGTACAGCATTCACTGAAAACCATTTGGATGACATATTTGATTCTGCTGACAAACCTCTTGAAGGGA GCCGGTGGTGGTTGAGCGCTGAAGATCCATTCCAGTGCTTAGCTGTGTGCATAACTCTCACTGAAGCTCTAAAAAGCTCTTCACCAGAAACATTCATTTC ACGTATTCCTATACATCAGGATGGCTCTTGTAATGGCTTACAGCATTATGCTGCCCTGGGAAGAGACAAGTTGGGAGCGGCTGCTGTCAATCTAGTTGCA GGAGAGAAGCCGGCAGATGTGTACTCAGGAATAGCAGCTAGAGTATTAGACATCATGCAAAGTGATGCTCAGAAAGATCCTGCAATATTTCCTGATGCTC TGCATGCAAGGACATTAGTTAATCAGGTGGATAGGAAATTGGTTAAACAAACTGTGATGACATCAGTGTATGGGGTCACTTACATTGGCGCACGTGAACA AATAAAGAGGAGATTGAAAGAAAGGGATGCCATTTCAGACGATTCAGAGCTTTTTGGTGCTTCTTGTTATGCTGCAAAGGTAACCTTAACTGCCTTAGAA GAGATGTTTCAAGGTGCACGAGGTATCATGAGCTGGCTTGGTGACTGTGCAAAAATAATTGCATCTGAAAACCAACCAGTGCGCTGGACCACTCCTCTTG GACTTCCTGTAGTGCAACCTTACCGTAAATTAGGAAGGCATATTATCAAAACTTCACTTCAAATATTGACGTTGCAGCAAGAAACAGATAAGGTCATGGT CAAGAGGCAGAAGACAGCATTTCCCCCAAATTTTGTTCACTCACTCGACGGTTCTCATATGATGATGACTGCAGTTGCCTGCAAAAAGGAAGGTTTAAAT TTTGCAGGAGTTCATGATTCATATTGGACGCATGCAGGTGATGTGGATCAAATGAACAGAATACTGAGAGAGAAGTTTGTGGAACTCTATGAGACACCAG TACTGGAAAATTTAGTGGAGGGCTTTCAGAGATCTTTCCCAAAGTTATCATTCCCACCCTTGCCTGAACGGGGAGACTTTGATTTAAGGGAAGTCTTAGA GTCACCATATTTCTTCAACTGATCCTGATTTGCAGCCTTCGGCTTGGATTCTGTCTTTTAAGGCTTACTGACAACAACTCAAGTTAATTCTGTGTGAGCA TTTCGCAACGACAACGGATCTTGTGGAAGTACTCATTATAGAGGCTGTTTCAGTGGCTGTATATATCATCAATGGCATCCATCCAGGGTCTTAAAGAGGA CCCTGTGGTATGATAATAATATTCATTTCCTAACTCCCTGGATGTTGATTTTTACTTGGACAGTTTTCTAAAGGGTTATACAAATGTTATGAGATAGAAG CTTTTGAAGCTAGCTAGTGTTTCAACTAGAGGGCTTACAAGGAAAAGCCAATGAATTAAAATTTGCAATGCTATTTACTTGAAGATTCCAGAGCTTCATT AACAATTTGAGTATAGCAAATTTGTGATCTGGTTCTGCACCCAAGTCACCCTGCAAATTATGCCATGGCTAGCTGCAAACTTCTTCATATCAACAGAGTA TGGTACTCTTGGTGTACCTTATTTTGGTACCCTTTTATTTTGGTTTTACATGTATGTGTATTTGTACAAGTTTTTTTCTCTTGTAAATGGAAAAAGAAAA AAACACAACAAGCATTTGTTTAAATTGGTGTACCACAAAATGATTTATAGTGATGTATACTAGCTTATTCCCTAACCTTTGAACTTATGAAACTTTTGTG ACTGAAGGGAATGGGCAAAAGTAAATTCATATTTCTACTTCCCAAAGTCTATGCATAAGAGCATCTACATGTGCTTTTCAACAAAAGTAAATTCATATTT CTAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_35449; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_263413
| Blastp | DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial from Nicotiana with 77.79% of identity |
|---|---|
| Blastx | DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial from Nicotiana with 78.21% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (107765810) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019420030.1) |
| Pfam | DNA-directed RNA polymerase N-terminal (PF14700.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |