Id Trinity | FTRINITY_DN53658_c1_g1_i5 |
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Name Transcript | Ll_transcript_264488 |
Sequence | CCAAAATCAATTCACTATTTGTTCTCTCTCTCTGACAGTGATTGGGGTTCTACAAAATTAACCATTTTTTGTTTTGAATTCTGATACTTTGATCAATGAA AGGGTTACTGAGTAATGTGATTAACCCAATTTCAATTGGTGTTAATGGAAGAACAAATCATCTTCATTATCCCCAATCTCTTCAACCTTCATCTAAATCA CTGCAATTTCATCTCGGAATGAACCATTCAAGGCCACTCCACATAACTGCTTCAATTAGGGCTTCAACTCAACATTTCCATAACACTGCCCCTTCCAAAG AGAATATTGAGCTATGGAGAAATGTTGATGCTGTGTGCTTTGATGTGGATAGCACTGTGTGCATCGATGAAGGTATCGATGAACTTGCTCTTTATTGTGG AGCTGGAAATGCTGTTGCTCAATTAACTGCTAGTGCAATGGGTGGTTCTGTTCCTTTTGAGGAAGCTTTGGCTGCTAGACTATCTTTGTTTAATCCCTCT TTATCTCAACTTCAGAGTTTTCTGCATCAACATCCTCCAAGGCTTAACCCTGGCATTGAAGACCTAGTTCAGAAGCTAAAGGCTAAAAATACTGATGTTT ATCTGATCTCTGGTGGATTCCGTCAAATGATAAATCCTGTTGCATCGATACTCGGGATTCCAAAAGAGAACATTTTTGCCAACCAACTGCTTTTTGGAAG CTCTGGGGAGTTTGTGGGGTTTGATAAAAATGAACCCACTTCAAGGAGTGGAGGAAAGGCTACTGCTGTGCAACAAATCAGGAAGGCCCATGGATACAAA TCATTAGCCATGATAGGTGATGGTGCAACTGATCTTGAGGCTCGTAGTCCAGGTGGTGCAGACTTGTTCATTTGCTATGGGGGTGTTCAACTTCGAGAAG CTGTTGCTGCAAAAGCTGATTGGCTTGTTTTCAGTTTTGAAGACCTCATAAAGTCTTTGGGGTAACTTCATTCCTTTTCATTCGGTAAGCTTTTTTGAAA CAAGCTAGAAGGAATTTATTTTCATGAGCTTTTTTATCGACAAGTTAAAGGAAGCTAGCTTATGGAAACATCATATCTTATTCTAATAAGCTCAAATAAG CATTTATTATGTAATAACTCTTCCAAACATGTGAATATACCACGTTTTGGTTTGCTTTATAGTGGTGGCTCATATTATAATGTTTTTTTAAAGGGCGAGG ATCAAATTACTCCAAGAGAGTAAGTCTAAAAGAGTTACTCTTCGTATTAACCATCAATTTTTTGGAAATCCGATGATTTAGATCTATTCATTAATTCAAA CTATTGGATTTCTCTGGAATTGATGGTTAGGA BLAST |
Tissue | flowers |
Gene name | LI_gene_35651; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_264488
Blastp | Phosphoserine phosphatase, chloroplastic from Arabidopsis with 74.21% of identity |
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Blastx | Phosphoserine phosphatase, chloroplastic from Arabidopsis with 74.21% of identity |
Eggnog | phosphoserine phosphatase activity(COG0560) |
Kegg | Link to kegg annotations (AT1G18640) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019451719.1) |
Pfam | haloacid dehalogenase-like hydrolase (PF00702.25) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |