| Id Trinity | FTRINITY_DN53667_c3_g2_i12 |
|---|---|
| Name Transcript | Ll_transcript_262748 |
| Sequence | CACAGTCTCATTGGAGGTAAGAAGATGAGGAGGAATGGCAGGCTGACAGTAAACGACGACGTGGAGTAAGGTGGAGCATATCACAACCTTTGCTTCACTC CTTTACCACACCATTTTTGGTTTCTTTTTAATTCATTTAACTACTTCTTTCTCCATCAGTGTAGATTAACATTCACAGAAATGTCGAAGCTTCTTCTACT TCCATCCACTCCTCACCTCACCTCTTTCCAACGCTCCCACTCACTCTCCTTTTCTTCTCCCATTCCATTCCAATCTCATTTCTCTCACACCTTTCCTAGA CACCTTTCCCTTCGTACCTTAAATTCCTCTTCTTCCTTTTCTTCTTCTTCCTCTGACCCTAAAACTAAGGAAGAAGAAGAAACTGACATTAACAATCTAA GTGATGAGGATTATCCAAGCGGTGAGTTTGAATTTGAACCTATAACGGGATGGAGAAACTTTCTTGTTAAACTCAAGATGCTCGTTGCGTTACCCTGGGA GCGCGTTCGCAAGGGCAGCGTCCTCACTATGAAGCTGCGTGGCCAGATATCTGATCAAGTGAAGAGTAGGTTCTCTCCGGGACTTTCTCTACCTCAAATT TGTGAGAATTTTTTGAAAGCAGCATATGATCCTCGCATTTCTGGGATCTATCTCCATATTGACAGTTTAAATTGCGGATGGGGTAAAGTGGAAGAAATTA GAAGGCACATATTGAATTTCAAAAAGTCAGGAAAATTTGTTGTGGCTTATGTCCCTACATGTCAAGAAAAAGAATATTACCTCGCGTGTGCATGTGAAGA GATATATGCCCCTCCAAGTGCTTACTTTTCTTTGTTTGGATTGACCGTTCAAGCTTCATTTTTAAGAGGTGTTTTAGAAAATATAGGAATTGAACCACAG GTGGAAAGGATTGGCAAATACAAAAGTGCAGGGGATCAACTAGCTCGAAGAACCATGTCCGAGGAAAATTGTGAGATGCTCACTGCTTTGCTTGATAGCA TTTATACAAATTGGTTGGATAAAGTCTCTTCTGCCAAAGGAAAGAGTAAAGAAGATATCGAAAACTTCATAAATGAAGGCATCTACCAAGTAGACAAGCT CAAAGAAGAGGGCTTCATATCAAACATAATCTATGATGATGAGGTCATTGCCCTATTGAAGGAAAGACTTGGAGTGAAAATAGATAAAAAACTGCCTATG GTGGATTACAGGAAATACTCTCGAGTTAGGAAATGGACAGTTGGGATATCAGGTGGTAAAGATCTGATAGCCATCATCCGAGCTTCAGGAAGCATTAGTC GTGTTGAGAGTCAATTAAGTGTTTCTAGCTCAGGTATCATTGCAGAGAAGCTCATTGAGAAGATTCGAAGTGTTAGAGAGTCAAAAAAGTATAAAGCTGC TATCATCCGAATTGACAGTCCTGGAGGTGATGCCCTTGCTTCTGATTTGATGTGGAGAGAAATCCGGCTTTTGGCTGCTTCAAAACCAGTCATTGCTTCA ATGTCTGATGTGGCAGCAAGTGGAGGCTACTACATGGCAATGGCAGCAGAAGCTATTGTCGCAGAAAGTCTTACCTTAACTGGTTCTATTGGTGTGGTTA CAGGAAAATTTAATCTTGGGAAACTGTATGAGAAGATTGGCTTTAACAAAGAAACAATATCAAGGGGAAGATATGCAGAGCTCTTTGCTGCTGAACAACG TCCTTTTAGGTAATATTATTTCTTCATTTTTCTACTATGAAGTTTCTAGAAAACCATGAGAGAATGTTAATCAGTATAATATGCCATTTGATATCTCAAC TGCAGATATTAGTGTTACTTTCTAAGAGGTTACCTATCCAACTCAAATATGCTGATATTGTCATGATGACTTTCTGTAAATGCTTAAAACAAAAAGCAAC AAATGAACTTAAATAAATGAAATCCAGTTTCTAACATTTGAAGGGGTTTACTTGATGCTTCGGGCTTACTGCTTATGATTCATACAACTTTCGCTTTTCT TCCTTACCTATATTTTTGGTGAACAAAAAGAGGGTATTCAGAAAACGGTTATGCAGTACTACTGATCAACATGCGTGAGAACCAGAACAGTGGGTAGAGG TTCACTTAGAGGATTATCTCCAGGGTGTTCCATCAATCTATAAAGCACCAATAATGATACCAGTATCCGTTATGATATGCATCTAATACGGTAATATGCT ATTTTTTGAAAGAATATAGGATATAATAGGTTTAGGATACACATATAAAATATGCGTATAAAATTCATATAAAGGGGAATAAGTTGGTTAGAAAGTGCAT CAACAGAAGAATCTACCCATTGTGGGACTCTACTTTTTCTCAATTCACTCAAAATAGAATTTATCTGACTTTTTTTTTCAATTCACTAAAAAGTATAATC TACCTAATGTAGGACTTCTTATTTTTTGAATTTCACTGTATGTTCCAACACTTATTGCATACAAATAGTATTGGTCTCATTGAATTCTTCATCGTCATTA GGGTGAGTCTTATAAATCAATGTAAATGTTTTTCAAACAGTCGAAGAAAGAATAACGAAAAATTGTCTCACGCAATATATATGTTTAAACTTTTTATCTC TACATTTCACTTGGTAGATTATGCGCTGTTTCTCTCTCTACACTTATAGTTGGCTGACTGTGTGTTTCCTTTTCTCTCTCTTAAAATTCTTTTTCATGGT AATTTCAGTGTTTGGAGTGGTATCGAAAAAACATTTTAAGAGCATTAGATGTAAGGATAGTTGAGGGTTTCTACAGCTATTTATGCTCTCCTTAACCTTT AATATTAATTCATGAGCCTTCCAGGGTTGGTGCATTTAGATTTTACTAATGACAGAGACAATTATGAAAGTTTTACTTTTTCTTTCTTGTTTTGATACAG ACCAGATGAAGCAGAGCTATTTGCAAAGTCTGCACAGAATGCTTATAAACAATTTCGAGATAAAGCAGCTTTATCCAGATCAATGACTGTAGATAAAATG GAGGAGGTAGCACAAGGGAGGGTTTGGACTGGTAAAGACGCAGCTTCTGGTGGTTTGGTTGATGCTATTGGTGGGCTTTCAAGAGCTATTGCCATAGCAA AATCAAAGGCCAAAATCCCTCATGATAGAAAGGTTACTCTTGTCGAGATCTCCCGACCCAGCCCTTCTCTACCGGAGATTTTATTAGGTGCCGGGAACAC CCTTGCTGGAGTAGACAGAACATTGAAGGAACTGCTGCAGGGCTTGACCTTTGGTGATGGAGTTCAAGCCCGGATGGATGGGATCATGTTTCAAACATTG GAAGGATATCCTAACGCCAACCCCATTCTGTTAATAATTAAAGACTACCTTAGTTCTTTGTAGTTCTTTATAATTCATAAGAATCATTTTATTTCTATTT TCAATGTAAAGCTTGAAAATTTCAATGTATTACAGTCCCAAATCCTCTTGGATTAAATGTAAGAATATGATGAAAAAATTGTTTTTGCATATAGATCTAT TCCTTGGGATTTCAACCTCA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_35748; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_262748
| Blastp | Serine protease SPPA, chloroplastic from Arabidopsis with 67.56% of identity |
|---|---|
| Blastx | Serine protease SPPA, chloroplastic from Arabidopsis with 70% of identity |
| Eggnog | Signal peptide peptidase, SppA(COG0616) |
| Kegg | Link to kegg annotations (AT1G73990) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019437141.1) |
| Pfam | Peptidase family S49 (PF01343.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |