| Id Trinity | FTRINITY_DN53689_c6_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_262852 |
| Sequence | AAAAAACAAGAGTCAATGATGAGTTACTAAACAAAACTCAAGCCTCTGAGCTAGATATCAAGATAGAATAACAATAATATATTATTTCTTCAAAACCCCT CTTTTTGTTCTCCTTCATCCTTAATCCCTATCATTCACAACTCACCCTTCAACTCGTTTTCTCCGAGGTAACCGCCCACAACAACGTTTTCTTTTCTCTC TTTCTTTGTCTCTATATTACACCCTTCTCTCTCTTTTTTCTAATGCATATTTTACTCTCAGATTCAACGTCTTTTCCTCTTCTTCCTTCTAATAACTTTC ACTCACAAAATGAGTGTTCCTAATACCACTCCGGCTATGATGTTCACGGCGGCTCAACCACTTTTCACGGTGGCTCAGTGGCAGGAGCTGGAGCACCAAG CCCTTATCTTCAAGTACTTGAAAGCTGGTCTCACTGTTCCACCAGACCTCCTCGTACCCATTCAGAAGAGCTTACAATCGATTATGGCTCATAAAAATTA CCCATCTTTGGGTTATTATGGAAATGGAAAGAAGATAGACCCAGAACCTGGAAGATGCAGAAGAACTGATGGGAAAAAATGGAGGTGTTCAAAGGATGCA CATCCTGATTCTAAATACTGTGACCGCCACATGATACGACGTCGTTGCCGTTCAAGAAAGCTAGTGGAATCTCAATCACAATCTTCTTCTTCTTCTGTTG CTACTACTGGGACCACAACAACTACTACTGTTTCTGCTGCATCTGGAACTGGAACCGGAACCGGAACCTTCCAGAATCTTCCATTGCAAACTAGTGGTAC CCGTCAAGGTTTCACTATTGGGAATATTGGGAATGGGAACAACAACAGCACCTTGAATATGATGGAGCCTTTGCCTCTTCCTACTGAGGATTCCAGGAAA GAGTTAAGGTATATCTATGATCTTTGCTGTTTATGTTTGATGTTGTTATCTTCACTGTAAATTGATTGAGATATTGGTGAGATTGTTTTGAATTTGGCAA CAATTTTAACCAATAGAAATAACTCCATAATTTCCTGATATATTAAATACAAGTTTTCCCAAGTACAAAGTTATATTTAAGTCTTGTATGAATGGATGTT TTCGTTATCGTTAACTCGTAGTATTTTGTTGCTTGGGGTTTTCTAATGATCAAAAGCAATTGTTGAAAAAAGTTAAATTTGTAATAATTAATTGAAAAGT AAAGGATCTAATAATGGAGAAGGTGGTTTGTAAAGGATCTAATATAGGAACTAAAGTAACTTGAATTTAACCCTTCCTATTTTGTTTTTCTTAATGTGTT CAAAACTGTTAGAGTTTTGGGTCCAGTAATGATTGTCAAACTCATAATTTCTAATGGGGTTTTTTCTTTTTTTGGAGGAGGGATCCACAAACAATGTTAT GTTATATATGGTATAGTTGTGACTCTAACTTCTAAGTTACCTAACATGTGGGTCAGTATGATGTGTGGGATGAAAGTAAGGTGTAAGTCATCTATTCACA GTTCTCGAGTTAGACTTACTTGATTCGTGTCTTTAAAAGATGCAGTACTAATAAGCAATGATCTCGAAAAGTTCAACCTAGCATTGTTGCCAAATTTTCA GCCTGTGAAAAGCTTAATTTAATACAATTTCAACATTGCCCTTTATGGACAGCAATCAAGTTCATCATGCATTTCTTGTTTTCTAGATTGCATTTAATTT GGTGTTGCATATTGTGGAAAACTTAATAAACTCTTGATTTTGTTGTACCTGAATTGTTCTCATATCATTCATTGTTATCATAAGTTGGTACTCCGTTCTA CTTATTCAAATATTTTGTAGACGTACTTTACATAACTAAAACATAGTGGAATGTTAACAAGTGCTGTAAGGGCTTCTTTAAGGATGCAAGTAAAAGAATT TTGCATTGGAAAATGATGTGTTTAATAATTCGTGAAGTCTTGAAGTCGGTTTTCCAACATTAACTTACATATCTTATATTCCTTAAACAATGCCCACGGG CACTTGTTAACACAACCCTAAAACATATTGTAAGAAGTGTGAGGCATGGTATGACCTTGTGACAAGGTTAATTAAGTATCACGGAATGGTTTGATAAAAA CTGGAAATGAAGGGATATTTAGTCATACTGCATATTAATATCAGTCTAAACTCTAAACCAAGAACTTAGCAGGAGAACTGATGTTAATGTATGATCCCAT TAAAACAATTAAGGAGAGGTATCAGTGAACTGTCGGAAAGGTGTTGAAGAAATTGCGAAATATAGCCTGTTTTTTGTAATTGTCCAGTGATACGATTTTC CAAAATTTGGCTATCAGTGAACTGTCGTAAAATCTTTCAATTATTTCTTTTGATGTCTTTCTTCATCTTGTTATTCTCATTTTTGTTTTTCTTCTATAGT ACTTTCAGATTGAACAGGCTGAACATTTCTTTTGTAGCCTTGTTACAGTTTGCTTTCCACCGGAGAAATCCTAATTGATTTTCCTCCATAGGTTTTATAT GTGCAGATGGTGGGTGCTTTTGTAGTACATGCTTGCAGTGACCCTCAGCCTCTAAGCATTTGGGTCCATTTGCAGCTTTTCATAATATTTTCTTCAATAC TTTTGATTTTTCTGCTAACTTCATATCATGCATAATTGACATAAACTTAACATCTCGACTTCTTACCATGAGATTACGGGTTCAAATCCCGAAAATAGCC TCCCAGCTACTAAGTGGGAGTCTCGTGCACTTGGTCACCCTTTTTTCTTATCATGCATAATTGACATAAACTGAACATCTTGATGTTTACTATTTACTCC ATAGGTTTGGACTGAGCTCAGAAGCAGATGAGCACAACTTCTTGCAGAAAGATCTGGGAACTATGAGACATCAAAGTTATTACGACTTCACATCAGATGA CACATGGTCTCTTATGTCTCAGATTCCGCAAAACATCATTTCAGAATCAAGAAATCGTTCTACTATGGTCAACAACTGCTTCCAACAGCAAACAATGCGA GATACCGAGCTGTTAAACCTCTACGACAACGGAAGGTCGAAGGAACTAGTCTTTGATGGTCAATTAAGCTCACCGGGGTGTCTGAAACAGGAATACCAGA CCCCTCAGTCTCTCTTCAGTGACTCTCACTTGAAGATGGATTTAAGCTCCTCTACCATTGACTATAGACCCATCATAGATTTTAATTGCAACCCAGATGA GAATTGATGCCATGCACCTTTATAAGGATTGCAAGGTAATGATGGTATAAATAAATAAATAAATGGAAGTCCTGCATTCAGATACTTGAGGGAATCATGG TTTAATTTCTAAGGTCCAAACATGTTTTTCTCTTATATTATATAGATGCATATATACTGGAAGGAGTTCTGCTTTCTTTATATGTCAACTTGTAATATTT GACTATGCTTTGATTTCCCTTTTAAATTTATTGTACTGTAATTTAGTTTGACTCTCTTCTTCTTGTCCTTGAAGTCCTTCTAGATACTATTTATATGGAT GGTTTATTATTTTGCATTAATTATTGTACAACTTTTTGTTACAAGGGGGAAGTTAGTATCCTCTTTATCAAAGGAGAAAAATATAATTATGTTATATTTT TATCTAGACAAGGACTTGCATCTTCATTATCGGC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_35943; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_262852
| Blastp | Growth-regulating factor 4 from Oryza sativa with 64.17% of identity |
|---|---|
| Blastx | Growth-regulating factor 4 from Oryza sativa with 68.27% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (4330436) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019422355.1) |
| Pfam | QLQ (PF08880.10) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |