Id Trinity | FTRINITY_DN53689_c6_g1_i3 |
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Name Transcript | Ll_transcript_262856 |
Sequence | AAAAAACAAGAGTCAATGATGAGTTACTAAACAAAACTCAAGCCTCTGAGCTAGATATCAAGATAGAATAACAATAATATATTATTTCTTCAAAACCCCT CTTTTTGTTCTCCTTCATCCTTAATCCCTATCATTCACAACTCACCCTTCAACTCGTTTTCTCCGAGATTCAACGTCTTTTCCTCTTCTTCCTTCTAATA ACTTTCACTCACAAAATGAGTGTTCCTAATACCACTCCGGCTATGATGTTCACGGCGGCTCAACCACTTTTCACGGTGGCTCAGTGGCAGGAGCTGGAGC ACCAAGCCCTTATCTTCAAGTACTTGAAAGCTGGTCTCACTGTTCCACCAGACCTCCTCGTACCCATTCAGAAGAGCTTACAATCGATTATGGCTCATAA AAATTACCCATCTTTGGGTTATTATGGAAATGGAAAGAAGATAGACCCAGAACCTGGAAGATGCAGAAGAACTGATGGGAAAAAATGGAGGTGTTCAAAG GATGCACATCCTGATTCTAAATACTGTGACCGCCACATGATACGACGTCGTTGCCGTTCAAGAAAGCTAGTGGAATCTCAATCACAATCTTCTTCTTCTT CTGTTGCTACTACTGGGACCACAACAACTACTACTGTTTCTGCTGCATCTGGAACTGGAACCGGAACCGGAACCTTCCAGAATCTTCCATTGCAAACTAG TGGTACCCGTCAAGGTTTCACTATTGGGAATATTGGGAATGGGAACAACAACAGCACCTTGAATATGATGGAGCCTTTGCCTCTTCCTACTGAGGATTCC AGGAAAGAGTTAAGGTATATCTATGATCTTTGCTGTTTATGTTTGATGTTGTTATCTTCACTGTAAATTGATTGAGATATTGGTGAGATTGTTTTGAATT TGGCAACAATTTTAACCAATAGAAATAACTCCATAATTTCCTGATATATTAAATACAAGTTTTCCCAAGTACAAAGTTATATTTAAGTCTTGTATGAATG GATGTTTTCGTTATCGTTAACTCGTAGTATTTTGTTGCTTGGGGTTTTCTAATGATCAAAAGCAATTGTTGAAAAAAGTTAAATTTGTAATAATTAATTG AAAAGTAAAGGATCTAATAATGGAGAAGGTGGTTTGTAAAGGATCTAATATAGGAACTAAAGTAACTTGAATTTAACCCTTCCTATTTTGTTTTTCTTAA TGTGTTCAAAACTGTTAGAGTTTTGGGTCCAGTAATGATTGTCAAACTCATAATTTCTAATGGGGTTTTTTCTTTTTTTGGAGGAGGGATCCACAAACAA TGTTATGTTATATATGGTATAGTTGTGACTCTAACTTCTAAGTTACCTAACATGTGGGTCAGTATGATGTGTGGGATGAAAGTAAGGTGTAAGTCATCTA TTCACAGTTCTCGAGTTAGACTTACTTGATTCGTGTCTTTAAAAGATGCAGTACTAATAAGCAATGATCTCGAAAAGTTCAACCTAGCATTGTTGCCAAA TTTTCAGCCTGTGAAAAGCTTAATTTAATACAATTTCAACATTGCCCTTTATGGACAGCAATCAAGTTCATCATGCATTTCTTGTTTTCTAGATTGCATT TAATTTGGTGTTGCATATTGTGGAAAACTTAATAAACTCTTGATTTTGTTGTACCTGAATTGTTCTCATATCATTCATTGTTATCATAAGTTGGTACTCC GTTCTACTTATTCAAATATTTTGTAGACGTACTTTACATAACTAAAACATAGTGGAATGTTAACAAGTGCTGTAAGGGCTTCTTTAAGGATGCAAGTAAA AGAATTTTGCATTGGAAAATGATGTGTTTAATAATTCGTGAAGTCTTGAAGTCGGTTTTCCAACATTAACTTACATATCTTATATTCCTTAAACAATGCC CACGGGCACTTGTTAACACAACCCTAAAACATATTGTAAGAAGTGTGAGGCATGGTATGACCTTGTGACAAGGTTAATTAAGTATCACGGAATGGTTTGA TAAAAACTGGAAATGAAGGGATATTTAGTCATACTGCATATTAATATCAGTCTAAACTCTAAACCAAGAACTTAGCAGGAGAACTGATGTTAATGTATGA TCCCATTAAAACAATTAAGGAGAGGTATCAGTGAACTGTCGGAAAGGTGTTGAAGAAATTGCGAAATATAGCCTGTTTTTTGTAATTGTCCAGTGATACG ATTTTCCAAAATTTGGCTATCAGTGAACTGTCGTAAAATCTTTCAATTATTTCTTTTGATGTCTTTCTTCATCTTGTTATTCTCATTTTTGTTTTTCTTC TATAGTACTTTCAGATTGAACAGGCTGAACATTTCTTTTGTAGCCTTGTTACAGTTTGCTTTCCACCGGAGAAATCCTAATTGATTTTCCTCCATAGGTT TTATATGTGCAGATGGTGGGTGCTTTTGTAGTACATGCTTGCAGTGACCCTCAGCCTCTAAGCATTTGGGTCCATTTGCAGCTTTTCATAATATTTTCTT CAATACTTTTGATTTTTCTGCTAACTTCATATCATGCATAATTGACATAAACTTAACATCTCGACTTCTTACCATGAGATTACGGGTTCAAATCCCGAAA ATAGCCTCCCAGCTACTAAGTGGGAGTCTCGTGCACTTGGTCACCCTTTTTTCTTATCATGCATAATTGACATAAACTGAACATCTTGATGTTTACTATT TACTCCATAGGTTTGGACTGAGCTCAGAAGCAGATGAGCACAACTTCTTGCAGAAAGATCTGGGAACTATGAGACATCAAAGTTATTACGACTTCACATC AGATGACACATGGTCTCTTATGTCTCAGATTCCGCAAAACATCATTTCAGAATCAAGAAATCGTTCTACTATGGTCAACAACTGCTTCCAACAGCAAACA ATGCGAGATACCGAGCTGTTAAACCTCTACGACAACGGAAGGTCGAAGGAACTAGTCTTTGATGGTCAATTAAGCTCACCGGGGTGTCTGAAACAGGAAT ACCAGACCCCTCAGTCTCTCTTCAGTGACTCTCACTTGAAGATGGATTTAAGCTCCTCTACCATTGACTATAGACCCATCATAGATTTTAATTGCAACCC AGATGAGAATTGATGCCATGCACCTTTATAAGGATTGCAAGGTAATGATGGTATAAATAAATAAATAAATGGAAGTCCTGCATTCAGATACTTGAGGGAA TCATGGTTTAATTTCTAAGGTCCAAACATGTTTTTCTCTTATATTATATAGATGCATATATACTGGAAGGAGTTCTGCTTTCTTTATATGTCAACTTGTA ATATTTGACTATGCTTTGATTTCCCTTTTAAATTTATTGTACTGTAATTTAGTTTGACTCTCTTCTTCTTGTCCTTGAAGTCCTTCTAGATACTATTTAT ATGGATGGTTTATTATTTTGCATTAATTATTGTACAACTTTTTGTTACAAGGGGGAAGTTAGTATCCTCTTTATCAAAGGAGAAAAATATAATTATGTTA TATTTTTATCTAGACAAGGACTTGCATCTTCATTATCGGC BLAST |
Tissue | flowers |
Gene name | LI_gene_35943; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_262856
Blastp | Growth-regulating factor 4 from Oryza sativa with 64.17% of identity |
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Blastx | Growth-regulating factor 4 from Oryza sativa with 68.27% of identity |
Eggnog | - |
Kegg | Link to kegg annotations (4330436) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019422355.1) |
Pfam | QLQ (PF08880.10) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |