| Id Trinity | FTRINITY_DN53693_c0_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_264819 |
| Sequence | ATTTGATTGAACTAGATTATATGTAATTTGTGAATCTGTTAAACTGAATTCTTTAGATATTCGTGATAATGTGCGTTCTGATAATCTGTGATGCTAATGT GGATATTAGTATTAAACTATGAATTTTTTCGCCTGCAGTTGACTTTTCAAGTGAGTTGTGAATTTTCCTATAGGAGGATATTCGTAAATTGAAATTGAGG TTTCTATATAAACTCTACATTTCTAATGAACATCGGATTGGAATTTTTTAGTAAATGTGCATTGTTTATTTATGATGGTGCTGTTTTTTGAGTTTATGTG GTTTGATGTTGCTGCTTTTCCCTTGTTTTTAGAAATAGAAAGTAAAAAGAGGATCATAATCTTCCGGTGCTACTTCCGGTGCTACTTTAAGTCTACTTTG ATTGTGTTTGCAATGATTACGCTATCCCTTGCATACCAATCGCTCAAAAACTGTAGTGGATTCTTATACTATTGTAGTGTTTGTGATTTTGTTTTTCATT CTGTGTTGTTTCTATAGAAGACCGTCTTAGAATGTAAATGGTATTTTGGATTTTGTTTTTGATGAGTTGTTTAATTTAGTTATGTGGTGTTTACTTCAGA TGTATCAGTAGCTTACTTCCTGTATCTCCTAGTATATTGTTTTTACTGGTAGCTAGCAGTAATAAATAATGGTTAATCGAGGCAAATCAAATTATTACTT TCAACCACATGAAATTTTCAAATCATGGTTTTGTTTGTTAAAGTAATTTGGGAATATGACCATTTTAGGGTTCAAAAGTGCTTCACCGCGATTTTTGTGA ACAATTGTAATGTTATGTTATTTGCTTATGGACAAGATTGATATTCTCTTATTTGTACATATTTTTGCCTGTAGTCCTGCTGAAGCAGCTAGACGAGGTC GATCTCCTCCACCTCCGTTTAAAAGAACTTCTCCTCCCCCAAGGAAGCCGTCTCCTATACGTGAATCACTTGTTCTTCATGTGGACAAACTAAGCAGAAA TGTCAATGAAGGCCATTTGAAAGAAATTTTTGGTAACTTTGGTGAGGTTGTAAGCGTGGAGTTGGCAATGGATCGAGCTGTTAATCTTCCAAAAGGTTAT GCATATGTGCAATTCAAGACAAGAGATGATGCTGAAAAAGCATTGTCATACATGGATGGTGCCCAAATAGATGGCAACATCGTTAAGGCAAGATTTACTC TACCTCCTCGACAGAAAGTTTCACCACCCCCAAAGGCTTCTGCTGTTGCTCCAAAGAGAGATGCACCTAAGACTGATAATGCTAGTGCAGATGCTGAAAA TGATGGGTCAAAGCGGCAAAGAGAATCGTCTCCACGGAGAAAACCTATCTCACCAAGAAGGAGATCTCCTGTGCCTCGAAGAGTTGGGTCGCCAAGAAGA CCAGATTCTCCTCGCCGTCGTGCAGATTCTCCTGTTCGTCGTCGATTAGACTCTCCTCCTTATCGTCGTGGAGACACACCTCCTAGGAGGAGGCCCGTGT CTCCTGGAAGAGGCCGTTCTCCATCTCCACCAAGGCGTCCTAGATCTCCTGCAAGAGTCTCACCTAGAAGGATGCGTGGCAGCCCAGGTCGCAGACGTTC TCCTCCTCCCCCAAGGCGCCGCTCACCACCTAGGCGAGCCCGTAGTCCTCCTAGAAGATCTCCAATTGGTCGTAGGCGCAGTCGCTCTCCAGTACGTAGG TCTGCACGCTCACGTTCGAGATCATTCTCACCTCGAAGGTAAATTTGCTGAATATGTTTCATTTCACTAAAATGAGCCACTGTTTTTTCCCCAATGCATT TGTTTTCGTGCATTAGAATATTTTGATAGAAGCAAATAAGGTGTGGAATGTTGTTTAGCATGTTAAATGGCAATTGTTGGAGTTGATGGATTTTGTAGTT ATCAAGATTTTTTTAAAGCACATACCCAATAAAAGCAAACATGCTTAAAACTTCATTTTTAAATAAAAATCTAGTAGTCAGGGATGTAGAGTACCATGTG TTAGCTATAACTCTATTGGTGGATGTATGAAACCCTGTTGTGTAGGAAGACATGCTTATTTCACCCAGTATACTCCTATGTCTTACACCAACCTTTGTAT GCATATGCATCAGAAAATGTGGGAAATTTTAGCACTATTGTGTCTGAATTTCTATTTATGTTATTCGCAAATTAATCCGTTACGATGAATTTTTAATAAT GAAAATATATATGATGTCCGAATAAAATTACCTCTTTGGTAGGGGTCGTCCACCTGTGAGACGTGGGAGGTCATCATCCTACTCTGATTCACCAAGTCCA CGCAAGGTTTGTCTAGTTTTTTCTTTATGTTTTGTCATAAGATAGTGTTATTCTTGCTTGGAATGTTCAATAGCTCATATGTTCATAATTTTGACAGATC CGGCGATCAAAGAGCCGCAGTCCAAGAAGGTTATGTATACTGTACTATATATATTTGTTTCTCATATGATTCCTTTTCTTGTTTGGTAACGGTCAGTTTT ATTTTCCCCAATATTGTTTTGTAATGTATATGAAGTTTCTTGTGCTTTTTTCCGACTTTTCTTCATTGCTGATGTAATTTTCTTTGTATGGTCTAAAAAA ATAGACTTCACCTTTTGAGAATTATAATTGTGATATTCTGGGTATGTCTTTTGAAGTGAAAGACTTGTTTTTCTTATAAGAAAGGCAATTAAAACATCAT TGGCAGCATGATAAGCTACCAGACATGTGTTTCCTTAAAAATTAGCACTACTTTTTCCTTAGAAATTATCACTGATCTAATGTGTTTCACTTGGTACAAT CTTCATTTGGTGAATGCTTAATGTAAGTAGGAATAGACTCTGCTCGATTTTGATTTGTTTTTCTGCAATAAGATTTTAGAAAGCAGATATTCTTGTGGGT GTTCATATTTCCATATTATAATATTTGAATTAGTATTAAACTATTAAACAGTTTGTCCTTTTAGATTTTCATTAACAATAAAAGATGTTTGTCTTCAACG CAACATTCCTTCGGCTTAACTTCGATAATATTGTATTGCTGATTCTTTTTTTAGGTTTTGTTTTATATAATTGTGTCTTCATCTGGGTTCTATGGTATGC TAAATATTGTTTGTAATTTTAGGCCTTTGAGAGGAAGAGGCAGTAGCAACAGCAGCAGTAGCAGTTCACCACTCCCACCACCACCTCCGCCTCCACCTCG CAAACCATAGATATTTCGTGTACATCTATTGTCTCCTTTTGTTTGATGTATTTGTGATGGTTCTATTATCATTATGACAAGTTATTCTAGCTTTAAGGTG CTAGAGAATGTTACTTTCTGTGGTCTGACTTGATTTTCTAATACAGTCCTGTAGCACTAAAAGTTCTGGAAACTTACTGTAACATTCATTTGTTATTCTG CTTTGACATGCAAAATTTGGGAGATATGATGCTTTGATTTCTTGCATCCGGATTTGTCAGAATTGAAAATTGGTTAATGGAATTGAATTATGTAACTTCT GTTTTATATAGTTTTTATCAAACATGATAGTTTAT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_35972; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_264819
| Blastp | Serine/arginine-rich splicing factor SR45 from Arabidopsis with 68.85% of identity |
|---|---|
| Blastx | Serine/arginine-rich splicing factor SR45 from Arabidopsis with 76.03% of identity |
| Eggnog | Rna-binding protein(COG0724) |
| Kegg | Link to kegg annotations (AT1G16610) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019425514.1) |
| Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF00076.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |