Ll_transcript_122615

Id TrinityFTRINITY_DN53703_c6_g1_i4
Name TranscriptLl_transcript_122615
SequenceCACAAACCCATCCACGAAAAGATGATTGCAGGATGAGATGATAGTAAAATGAAGTGCTTTAAGCACCACCAGTTACAACAACAGCAAAATTAATGGCCTC GCTAAGATTTTCCATTTCCCTCGATACTTTCGACTCCAAGATTCCAATTCCTTCTATTTCCTGTACCTTCAAATCTCTGCGCAAAACAAAGTACATTAAA TTCAAGGGTTCGGTGGCGGAGAATCTCAACTCCAAGCCTCAGGTTCGGAGCCCGAAGAGCGAATTTTCGAAATTCCGTTACACAAAGAAGAAAAACAATG CTTCACTAGATGCAGATAAGTTCCTTGTACACGTGGACGGTGGTGATGTCGACGTGGATTACACTTCCCTTGGGGTTCAACTGAGCGTTGAACATTGCAA CGCAATCTTGAAACGACTCGATGAGAGAACCAACAATGAAGACAAAACGGTGTCGTTTTTCGAGTGGATGAGGAAAATGGGGAAGGTGGAACGCAACGCC AGTGCTTACAACGTCGTCGTTCGCGCGTTGAGCAGGAAACAAGAATGGGAAGTTGTAGAGAAATTGATTTGGGAAATGAAGACAAAATTCGGCTCCGAAT TGGGGTTTCAAGTTTTCAACACAGTTATATTCGCGTGTTGTAAAGGGAATTTTGTGCAATTAGGGGCAAAATGGTTTAGAATGATGTTGGATTGTGAAGT TAAACCTAACGTCGCGACGTTCGGTATGTTGATGGGGCTTTACAGGAAGGGTTGGAATGTTGAAGAGGCAGAGTTTGCATTTTCTCAAATGAGGAAATTT GGGATAATGTGTGAGTCTGCATATTCAGCTATGGTAACTATTTATACCCGTTTAGGGTTGTATGAGAGAGCTGAAGGGGTCATTGATTTGACGAGAAAAG ACGAAGTGGTTCCTAATTTGGAGAATTGGTTAGTGATGTTGAATGCTTATAGCCAACAAGGGAAATTGGTGGATGCCGAGAAAGTGTTGGTTTTGATGAA AGAAGCAGGGTTTGGTAACAATATTGTTGCTTTTAATACTATGATAACTGGTTATGGGAAAGCGTCTCATATGGATGCTGCTCAAAGTGTTTTTATCGAT ATGAGGAATCTTGGGTTGGAACCTGATGAAACCACTTATCGGTCTATGATTGAAGGCTGGGGAAGAGCTGGTAATTATGAAGAAGCCAAACATGGAGATG AAGAGGGTGCTATTGGATGTCTTGAGGATATGGAAGAGATTGGCTGCCAGTATTCTTCCATGCTTGGTATTCTTTTGAACGCGTATGAGAGTGCTGGAAA GGTTGATAGAGTGCCAATTTTGCTTCAAGGGGAATTTTATCAGCACATTCTTGTCAACCAGACTTCTTGCTCCACTCTAGTCTTGGCTTATGTAAAACAT CAGTTGGTGGATGATGCCATGAAACTGTTGCATGTCAAGAAATGGCACGATCCACGTTATGAAGATCACTTGTATCATCTTTTGATTTGCTCGTGTAAAG AGGAAGGTTTGTTGGAGGATGCTGTTAAGATATACTGTCAGATGCCCAAAAATGATCACAAGCCAAATGTGCACATTGTATGCACCATGATTGACATTTA CAGCATCATGGGGCTATTCATTGAAGCAGAGATGTTGTATCTGAAGTTGAAATCTTCAGGAATTTCCTTGGATATGATTGCCTATAGCATTATTGTAAGG ATGTATATCAAAGCTGGATCTTTGAAAGATGCTTGCTCTGTTTTGGATGCAATTGACAAGCGAACGGATATTGTTCCAGATAAATTTCTGTTGCTTGATA TGTTGCGTATTTATCAAAGATGTAACATGGTTAATAAATTAGCTGATCTGTACTACAGAATCTCAAAAGACAGAGTGAATTGGGACCAGGAACTATACAA TTGTGCCATAAACTGCTGTGCCCATGCTCTGCCAGTCGATGAGCTTTCCAGGCTTTATGACGAGATGCTCGAGCGTGGATTTGTACCTAACACGATTACC TGTAATGTAATGCTTCATGTCTTTGGGAAAGCCAGACTCTTCAAGAAGGTGAGGAAGTTGTTCGTCATGGCTAAGAAACAAGGCCTGGTTGATGTGATCT CTTATAATACTATCATAGCTGCATATGGGAAACATAAATACTTCAAAAACATGTCATCAATGGTTCGGAAGATGCAATTTGATGGATTTTCAGTTTCCCT TGAAGCCTACAATTCAATGCTGGATGCTTATGGAAAAGACAACCAAATGGAGGCCTTTAGATCTGTATTGCAAAAGATGAAGGAATCAAATTGTGCCTCC GACCACTATACATACAACACCATGATCAATATCTATGGAGAGCAAAGATGGATTACTGAAGTCGCTGACGTGCTTACAGAATTGAAAGAATGTGGACTTA GACCTGATTTATACAGTTATAACACATTGATCAAGGCATACGGAATTGCAGGAATGGTGGAAGGTGCTGTCGGATTGATCAAGGAAATGAGAGAAAATGG AGTAGAACCAGATAAGATAACCTACACTAATCTAATCACTGCAATGAGAAGAAATGATCAATTTTTAGAAGCTGTTAAATGGTCCTTGTGGATGAAGCAG ATAAAACTCTGAATGACAACTGAATATCAGTGTAATATGTCTCCTTTAGTATGTCTCTCTCACTCACACATAAGTATAGACATGCATGCACACGCATATG CACAAAGTAGCAAATACCACTGGTCTTAAGTTTAGAAGGTACTATGACTATGATGGAGTATGTCTAGCATAGTCTTTTTGCTTAATGAGAATGAAAGAAT AAAAGCCTCATATTGAAGAGGGTCTCAATATTTCCCATGTTTGTGTAGTATGGACTGTTGAATCTGCATCTATCACATTTGTTTTTTGGGTTTTAATTAT AAATATCTGTCTAGTACTTTTAGGCAAAATATTTTGTTGATAGATGCATTTAAACATAATTCTCACATTTGAACCACGAATTGTTTTCTCGTACCGACTC ATGAATTTTTTTCGAACTGATTCCCTTCCAGGAACGAACCGGATTTTTACTCACGGTTTAAATAAAAAAAGAAGAATAATTGATAATATATACTCATTTA CATGAATGAGTTACAACAAATGTTGACTCATACCTACAA BLAST
Tissueflowers
Gene nameLI_gene_36070; 
Additional informationdetails; 

Expression of Ll_transcript_122615

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_122615
BlastpPentatricopeptide repeat-containing protein At4g30825, chloroplastic from Arabidopsis with 56.92% of identity
BlastxPentatricopeptide repeat-containing protein At4g30825, chloroplastic from Arabidopsis with 56.92% of identity
EggnogPentatricopeptide repeat-containing protein(ENOG410Z7Z7)
KeggLink to kegg annotations (AT4G30825)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019443020.1)
PfamPPR repeat (PF01535.19)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;