Ll_transcript_122616

• Id Trinity: FTRINITY_DN53703_c6_g1_i5
• Name Transcript: Ll_transcript_122616
• Sequence: CACAAACCCATCCACGAAAAGATGATTGCAGGATGAGATGATAGTAAAATGAAGTGCTTTAAGCACCACCAGTTACAACAACAGCAAAATTAATGGCCTC GCTAAGATTTTCCATTTCCCTCGATACTTTCGACTCCAAGATTCCAATTCCTTCTATTTCCTGTACCTTCAAATCTCTGCGCAAAACAAAGTACATTAAA TTCAAGGGTTCGGTGGCGGAGAATCTCAACTCCAAGCCTCAGGTTCGGAGCCCGAAGAGCGAATTTTCGAAATTCCGTTACACAAAGAAGAAAAACAATG CTTCACTAGATGCAGATAAGTTCCTTGTACACGTGGACGGTGGTGATGTCGACGTGGATTACACTTCCCTTGGGGTTCAACTGAGCGTTGAACATTGCAA CGCAATCTTGAAACGACTCGATGAGAGAACCAACAATGAAGACAAAACGGTGTCGTTTTTCGAGTGGATGAGGAAAATGGGGAAGGTGGAACGCAACGCC AGTGCTTACAACGTCGTCGTTCGCGCGTTGAGCAGGAAACAAGAATGGGAAGTTGTAGAGAAATTGATTTGGGAAATGAAGACAAAATTCGGCTCCGAAT TGGGGTTTCAAGTTTTCAACACAGTTATATTCGCGTGTTGTAAAGGGAATTTTGTGCAATTAGGGGCAAAATGGTTTAGAATGATGTTGGATTGTGAAGT TAAACCTAACGTCGCGACGTTCGGTATGTTGATGGGGCTTTACAGGAAGGGTTGGAATGTTGAAGAGGCAGAGTTTGCATTTTCTCAAATGAGGAAATTT GGGATAATGTGTGAGTCTGCATATTCAGCTATGGTAACTATTTATACCCGTTTAGGGTTGTATGAGAGAGCTGAAGGGGTCATTGATTTGACGAGAAAAG ACGAAGTGGTTCCTAATTTGGAGAATTGGTTAGTGATGTTGAATGCTTATAGCCAACAAGGGAAATTGGTGGATGCCGAGAAAGTGTTGGTTTTGATGAA AGAAGCAGGGTTTGGTAACAATATTGTTGCTTTTAATACTATGATAACTGGTTATGGGAAAGCGTCTCATATGGATGCTGCTCAAAGTGTTTTTATCGAT ATGAGGAATCTTGGGTTGGAACCTGATGAAACCACTTATCGGTCTATGATTGAAGGCTGGGGAAGAGCTGGTAATTATGAAGAAGTGAGGCGGTACTATA AAGAATTGAAACGGCTGGGGTACAAGCCAAATTCGTCTAACTTGTTTACACTGATAAAATTGCAGGCCAAACATGGAGATGAAGAGGGTGCTATTGGATG TCTTGAGGATATGGAAGAGATTGGCTGCCAGTATTCTTCCATGCTTGGTATTCTTTTGAACGCGTATGAGAGTGCTGGAAAGGTTGATAGAGTGCCAATT TTGCTTCAAGGGGAATTTTATCAGCACATTCTTGTCAACCAGACTTCTTGCTCCACTCTAGTCTTGGCTTATGTAAAACATCAGTTGGTGGATGATGCCA TGAAACTGTTGCATGTCAAGAAATGGCACGATCCACGTTATGAAGATCACTTGTATCATCTTTTGATTTGCTCGTGTAAAGAGGAAGGTTTGTTGGAGGA TGCTGTTAAGATATACTGTCAGATGCCCAAAAATGATCACAAGCCAAATGTGCACATTGTATGCACCATGATTGACATTTACAGCATCATGGGGCTATTC ATTGAAGCAGAGATGTTGTATCTGAAGTTGAAATCTTCAGGAATTTCCTTGGATATGATTGCCTATAGCATTATTGTAAGGATGTATATCAAAGCTGGAT CTTTGAAAGATGCTTGCTCTGTTTTGGATGCAATTGACAAGCGAACGGATATTGTTCCAGATAAATTTCTGTTGCTTGATATGTTGCGTATTTATCAAAG ATGTAACATGGTTAATAAATTAGCTGATCTGTACTACAGAATCTCAAAAGACAGAGTGAATTGGGACCAGGAACTATACAATTGTGCCATAAACTGCTGT GCCCATGCTCTGCCAGTCGATGAGCTTTCCAGGCTTTATGACGAGATGCTCGAGCGTGGATTTGTACCTAACACGATTACCTGTAATGTAATGCTTCATG TCTTTGGGAAAGCCAGACTCTTCAAGAAGGTGAGGAAGTTGTTCGTCATGGCTAAGAAACAAGGCCTGGTTGATGTGATCTCTTATAATACTATCATAGC TGCATATGGGAAACATAAATACTTCAAAAACATGTCATCAATGGTTCGGAAGATGCAATTTGATGGATTTTCAGTTTCCCTTGAAGCCTACAATTCAATG CTGGATGCTTATGGAAAAGACAACCAAATGGAGGCCTTTAGATCTGTATTGCAAAAGATGAAGGAATCAAATTGTGCCTCCGACCACTATACATACAACA CCATGATCAATATCTATGGAGAGCAAAGATGGATTACTGAAGTCGCTGACGTGCTTACAGAATTGAAAGAATGTGGACTTAGACCTGATTTATACAGTTA TAACACATTGATCAAGGCATACGGAATTGCAGGAATGGTGGAAGGTGCTGTCGGATTGATCAAGGAAATGAGAGAAAATGGAGTAGAACCAGATAAGATA ACCTACACTAATCTAATCACTGCAATGAGAAGAAATGATCAATTTTTAGAAGCTGTTAAATGGTCCTTGTGGATGAAGCAGATAAAACTCTGAATGACAA CTGAATATCAGTATGAGTAGCAAAGAAGGGGGCCCTCAATAGTTTTGATATTGGAAAACCTCTTGGAAGGAGAAAATCTTTTGATTGAGGAGGCATCAGT ATCCGATTCCCCAAAGCCGTCAGCAATGTTTTCAATATTCTTTCTCTCAATTCTTTCTGTGATTTTTTGGAGCAAATGTTGCTCATGTTTTATTATATTT TTTCAGTTGACAGGTTTCATTATATTTTCCGGTTTTGCTCCTGAACAAATATTGCTTATATTTTATTATGTTCTTCTCTATATTTTTTAGCAAATATTGT TCATATTTTATCTCATTCTTTG
• Tissue: flowers
• Gene name: LI_gene_36070;
• Additional information: details;

Expression of Ll_transcript_122616

FPKM

• FPAB: 1.7
• FPNAB: 1.7
• LF1: 2.8
• LF2: 2.1
• LF3: 1.8
• LF4: 1.9
• UF1: 1.6
• UF2: 2.4
• UF3: 2.1
• UF4: 0.7

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_122616

• Blastp: Pentatricopeptide repeat-containing protein At4g30825, chloroplastic from Arabidopsis with 59.01% of identity
• Blastx: Pentatricopeptide repeat-containing protein At4g30825, chloroplastic from Arabidopsis with 59.01% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT4G30825)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019443020.1)
• Pfam: PPR repeat (PF01535.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;