| Id Trinity | FTRINITY_DN53713_c3_g1_i7 |
|---|---|
| Name Transcript | Ll_transcript_122170 |
| Sequence | AAAGAAGTTTCCATAGAAAGAATACTGTGAGGAGTTTTCTGCTATTGTTGAGTTGAGACATTTCTTCATTCTCAACCAACAAAACCGTCATACAATTCCA ATTTTACCCTTCACTTCTTCTTCCTCTTCTTTTCCTTCTTCATTCCCCTTTATTCATTCCTCGTTTTTTTATTAAAAAAAACAAATTTTATTTTCTCAAT CGATTATTCAAAACACCCATAATAGCTATGCAGAGCCAAGTTGTATGTAATGGGTGCAGGAACATTTTGCTTTATCCTAGAGGGGCAACCAATGTTTGCT GTGCATTGTGCAACACAATTACATCTGTTCCTCCACCTGGAATGGAAATGTCACAACTTTACTGTGGAGGCTGCAGGACGTTGCTAATGTATGCACGTGG AGGTACAAGTGTAAGATGTTCCTGCTGTCACACTGTAAACCTTGTACCAGCTTCTAATCAAGTCAGCCATATCCATTGTGGGAACTGCCAGACAACACTC ATGTATCCTTACGGAGCTCCGTCGGTCAAATGTGCACTTTGTCACTATATCACTAATGTCAGTGTAAGTATACATTTATAGAATGATATTATCACGTGCA TTCTCTCTCTATCCTTATAAGGTGGCAAGCATAAACCTACTTTTTGCTATTGAGCAGCTTGTTGACATCTAATTCAACATTGGAGCTGTAAAAAGGATGA TATTCATCATATGCTGAATACGTGGTGGTTCATGTGACAGTCATAGTTATTCTCTAAATTTCTCTATGCCCGTTTATTGTTATTGCCATGACATGAAATC TTGGAAATATAATATGGAAATACTTTGCCTTTCATGTAGTTGTTCTTTGAGCTGATTTTTTCTACCTCTTGTGTCATCTGTTTCTCCTCCTTGTCTTTTG TAGACAACCAATGGAAGGCTTCCGATTCCCGGCCAAAGACCTAATGGAACAACCAACCAAGGAACCGTATCTTCTACTCCAACATCCATGCCACACTCTC AGAGCCAAACTGTTGTAGTAGAAAATCCTATGTCTGTTGATTCGAGTGGGAAACTGGTGAGCAATGTCGTCGTCGGCGTTACAACGGAAAAGAGATGATG CTTAACACATTATGAAGTTATGTGTTAAAAGGGACACTATTTAAAGCATTATCAGTTGCTGGCACATGAAGATATTGTCTGTGTAAATGATGTTACAGCC TGCAATGGTTAAATTGAAGTCAATTATCTTTTTGCCAATTCAAGGTTTAAACTTCAAACTGATTTCATGTATGTATGTATGTATGTATAGTTGTATACAA GGAGGACTAGTGGTGAGTGCTGATATAACTTATGTGATTGCCAGGGTACACTTTTTTTTGCTGCCATTGTATCTATATCCATATCAGTTGGTTTTTTCAG ATTATGTCTCAGAAGTGATTGTCCTAGATTTTTTTGTTGTGACTTGAAAAGCATGGGGTAACATTGCTTTTTACATGTTAATACTTGCTGTTATACAAGA TATACAACTTATTAGGTAGGGTTGGATCTATCATAAATCATGTACAAGCATAGCTTAATATGTTATAGCTTTTTAACAGTGGGTGCTACTTTTTAGTAAG GATGCAAACTCTCACTTTCATGTGAAGAAAGTGAAAGATGCAACTCAATATAGTTGTGATATGGCTTCTCTCCT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_36162; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_122170
| Blastp | Protein LSD1 from Oryza sativa with 67.26% of identity |
|---|---|
| Blastx | Protein LSD1 from Oryza sativa with 67.26% of identity |
| Eggnog | LSD1 zinc finger domain containing protein, expressed(ENOG410YHD1) |
| Kegg | Link to kegg annotations (4344713) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019435338.1) |
| Pfam | LSD1 zinc finger (PF06943.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |