| Id Trinity | FTRINITY_DN53713_c3_g1_i8 |
|---|---|
| Name Transcript | Ll_transcript_122174 |
| Sequence | AAAGAAGTTTCCATAGAAAGAATACTGTGAGGAGTTTTCTGCTATTGTTGAGTTGAGACATTTCTTCATTCTCAACCAACAAAACCGTCATACAATTCCA ATTTTACCCTTCACTTCTTCTTCCTCTTCTTTTCCTTCTTCATTCCCCTTTATTCATTCCTCGTTTTTTTATTAAAAAAAACAAATTTTATTTTCTCAAT CGATTATTCAAAACACCCATAATAGGTATTCTTAGATCCTTCAAATTTACTTGTATATTTGCGATTCATCACCAATTTCTTTTATATTACTTTTTTTAAT TAATTTTATAAATTTTTGTTTTAGGTTTCTTTCTGGGTTAGCTTTATTTTGTTTTCTGACCACACATATCTCCAATTTGGATGTGTTTACCGTTTAAAAT ATGCAAAAGATTAAATTTTGTGATAGCATATATGTCTTATTGCAAATTCTATGATTATTGTTTCATATTTGAATTATCTGCAAGGATTAATAATTTTTCA TCCAAATTAAACTGATCTAAGATTAGTTTATATATGATTGTAATTTGTTTTAGTAGATTTAATTTTTGTTTTAGTTGATTGGTGTTTTTAACTTTGCAGC TATGCAGAGCCAAGTTGTATGTAATGGGTGCAGGAACATTTTGCTTTATCCTAGAGGGGCAACCAATGTTTGCTGTGCATTGTGCAACACAATTACATCT GTTCCTCCACCTGGAATGGAAATGTCACAACTTTACTGTGGAGGCTGCAGGACGTTGCTAATGTATGCACGTGGAGGTACAAGTGTAAGATGTTCCTGCT GTCACACTGTAAACCTTGTACCAGCTTCTAATCAAGTCAGCCATATCCATTGTGGGAACTGCCAGACAACACTCATGTATCCTTACGGAGCTCCGTCGGT CAAATGTGCACTTTGTCACTATATCACTAATGTCAGTACAACCAATGGAAGGCTTCCGATTCCCGGCCAAAGACCTAATGGAACAACCAACCAAGGAACC GTATCTTCTACTCCAACATCCATGCCACACTCTCAGAGCCAAACTGTTGTAGTAGAAAATCCTATGTCTGTTGATTCGAGTGGGAAACTGGTGAGCAATG TCGTCGTCGGCGTTACAACGGAAAAGAGATGATGCTTAACACATTATGAAGTTATGTGTTAAAAGGGACACTATTTAAAGCATTATCAGTTGCTGGCACA TGAAGATATTGTCTGTGTAAATGATGTTACAGCCTGCAATGGTTAAATTGAAGTCAATTATCTTTTTGCCAATTCAAGGTTTAAACTTCAAACTGATTTC ATGTATGTATGTATGTATGTATAGTTGTATACAAGGAGGACTAGTGGTGAGTGCTGATATAACTTATGTGATTGCCAGGGTACACTTTTTTTTGCTGCCA TTGTATCTATATCCATATCAGTTGGTTTTTTCAGATTATGTCTCAGAAGTGATTGTCCTAGATTTTTTTGTTGTGACTTGAAAAGCATGGGGTAACATTG CTTTTTACATGTTAATACTTGCTGTTATACAAGATATACAACTTATTAGGTAGGGTTGGATCTATCATAAATCATGTACAAGCATAGCTTAATATGTTAT AGCTTTTTAACAGTGGGTGCTACTTTTTAGTAAGGATGCAAACTCTCACTTTCATGTGAAGAAAGTGAAAGATGCAACTCAATATAGTTGTGATATGGCT TCTCTCCT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_36162; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_122174
| Blastp | Protein LSD1 from Arabidopsis with 66.31% of identity |
|---|---|
| Blastx | Protein LSD1 from Arabidopsis with 65.1% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (AT4G20380) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019415966.1) |
| Pfam | LSD1 zinc finger (PF06943.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |