Ll_transcript_123033

• Id Trinity: FTRINITY_DN53718_c2_g1_i12
• Name Transcript: Ll_transcript_123033
• Sequence: CCACTTACTTGGTTGCAAATAACGTGCGTACATTTTTCAAAACACCCGCCTCAACCCGATAACGGTGGAGAAGCTCGTAACCGAAGACAGAAAAGATAAA AAATGGCATCGGTGACGGTTGCGGCGGCGTCAATGTTGTTATCTGGTGGCTGCCGGAGCTTCCGCTTAACTGCGGCAGCGCGCGCTCTTGGAATCTCTCC CTCAGCTCTTGTCAAGCACTACAATAACCACGCGCCGAGTCAGTGTTATCGAAGTTCACATAACAGTAACACTATACTTGCCGTTGAAACTAACTCCTCA ACAATCGATACCACACCTTCTTCGGAAAGCTACCAAATCTATGATCGATTACTTCCATGTCCATCGCACAAATCTCCACCAAGAATTGAGCACTTAGTTG TATCAGAAGAAGGATCCGTGTTAGAATTTATTTGCAAAGCACTCGATCTTCCTCCTCTGTATGTTTCAGATTTAATTCAATTTGGAGCTGTACACTACGC TCTTGTATGTCCACAACCTCCTCCTAATGCTACAGAAGAGCAAATTAGGACATTCAAAGAAGTAACTGATCCATCGGTTTTGCGAAAAAGAACTTCAATC AAGGGGAAAACTGTACGAGAGGCACAAAAGACTTTTCGTATAACCAGTGTGGATCAATTTGTTGAACCAGGAATGTACATACGAGTTCATGTACATCCTA AACGCTTTCCTAGGTGCTATGAAATTGACTGGAGATCAAGGATAATTGCTGTGGCAGAATCGTATGTAGTTTTGGATAAACCTGCTGGTACATCAGTAGG TGGCACTACTGACAACATTGAAGAAAGTTGTGCTACCTTTGCAACTCGTGCCTTGGGACTTACAACCCCTTTGATGACTACCCATCAGATTGATAATTGC ACTGAAGGCTGTGTGGTGTTAGCTAGGACCAAAGAGTATTGCTCTGTGTTTCATGGCAAAATCCGTGAGAAAAAAGTGAAGAAGCTCTATCTTGCTCTTG CTGCTTCTCCTTTGCCAACTGGAATCATTACCCATTATATGCGTCCTTATAACATGGCTCCTCGACTTATTTCTGAAGATTTTATTAAGGGATGGCCTCT TTGTCAACTTGAGGTCATGGAATGCAGAAGGGTTCCCTGGCCAAGTACTGTTATTCAGGGCAAATACTGTGTGGAAGACTGTGGATGGCCTTCCCAAGAT TATGCTTATGAGTGTACAATCAATCTTCTTACTGGTCGAACTCATCAGATCCGAGCTCAATTTGCTGCCTATAAGGCACCATTAATTGGTGATTCTATGT ATATGCCAGCTGCAATCGCAGAGATGGCTAACCCTGGACTTAATCCATTTGGAAAATACAAGAAAGAATTCAGCTGTGAGAATGAAAAAGAAACCGCTGT TATAAATTGGACTGCACAACATGGAAAAGAACCGGGTGTTGCAATTGGTCTTCAGGCATGTCAAATTTCATGGGATGATGGTGAACACTTTTACAATGCC GGCTCGCCTTGGTGGAGGAGTGAAACTGCTTGAAATGTGTGCTTTATGGATTGGTATAAAGTGTAATGTTATGTTTTTGTTGTAGTCCAGGTTTAAGTAA GTATACAATCATCCATGTTGGAAATATCCTGATATCATTTTACTCCTAATTTGTATATGCAGATATAAATATTCAAAAGACAAGAAGATCAAGTGGTGAT AGACCATTTAATGTTGGTTTGTCGTCCAATGGAGTAAGCTTGCCAGATTTTCTTCAAGTAAGGAAAAAAGGAAGACGTGTGGTTGTGAAACACTGTCATA TGCTGGAGAACCTTGTGACACCCTTTCTACCAAAGCAACTCTGAACAGGTAAGCCAGATAGGATAGGTTATTCACGAGGTAAGCCATTTCCATAAATAGA GAGAATTTAGTTTATTATTTTACTTTGAGATTGAAGAACTTAAAAAATGTCATATATTAATGGAAATACAGCTGACTGAGATACTATAATGTGGTAATAT TGCCTTAACCTCACCTCAAAATGTATGTAATTTGCTTTACTGTTCTGTCATATTTTGGCATGGGGCCTTGGGTTGCTGCATATTTGGATTCACCTTGAAA TTTAAAAGGAC
• Tissue: flowers
• Gene name: LI_gene_36209;
• Additional information: details;

Expression of Ll_transcript_123033

FPKM

• FPAB: 0
• FPNAB: 0.2
• LF1: 0.1
• LF2: 0.1
• LF3: 0.3
• LF4: 0.2
• UF1: 0.2
• UF2: 0.3
• UF3: 0.1
• UF4: 0.3

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_123033

• Blastp: RNA pseudouridine synthase 6, chloroplastic from Arabidopsis with 66.53% of identity
• Blastx: RNA pseudouridine synthase 6, chloroplastic from Arabidopsis with 66.53% of identity
• Eggnog: pseudouridine synthase activity(COG0564)
• Kegg: Link to kegg annotations (AT4G21770)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019418851.1)
• Pfam: RNA pseudouridylate synthase (PF00849.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;