Id Trinity | FTRINITY_DN53720_c1_g3_i3 |
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Name Transcript | Ll_transcript_121737 |
Sequence | ACCACTTCTTCTTCACCTCAAATATTCATTACTCTCTCTTATCATCATCTCTTTTCACCAGATTGAGTTAGGGTTTGATTGGAAATAAGAATGGGGAGAG GGAAGATCGTGATAAGGAGGATCGATAATTCGACGAGTAGGCAAGTGACGTTCTCGAAGCGAAGGAGCGGTTTGTTGAAAAAGGCGAAAGAGCTTGCGAT CTTGTGTGATGCTGAGGTAGGAGTTGTGATTTTCTCTAGCACTGGTAAACTCCACGAATTCTCCAACACCAGCATGAAATCAGTAATTGATCGATACAAC AAAACCAAGGAGGAGCATCATCCATTTGGGAATTCAACATCTGAAGTTAAGTTTTGGCAAAGGGAGGCAGCAATGCTACGGCAACAGTTGCAGGACTTGC AAGAAAGTCACAGGCAAATGATGGGAGAAGAACTGTCAGGATTGACTGTCAAAGAATTACAGACTTTGGAGAACCAACTGGAAATTAGCCTCCGTGGTGT CCGTGTGCAAAAGGACCAACTTTTAATGGATGAAATACAGGATCTAAATCAAAAGGGAAAGCTCATACACCAAGAAAATATGGAGTTGTATAGGAAGGCA AACTTAATTCATCAAGAAAACACAGAACTCCAAAAGAAGGTATATGGAACAAGAGATTGGAATGGAACAAAACGGAATTCTGTTCTCACAAATGGTATAC GCATAGAAGCAAATTTGCATGTTCCCGTGAGTCTCCAGCTAAGCCAGCCACAGCAACAAAACTATGAGGAACCTACAGAAGCTACAAAATTGGGGTATGG TCTCATTTAGCTACATGATAATTAAATAATGACAAAACACCAGAAATCTTGATATGAGTTTATTGGGATTGCTCATTGGTGTAGCAGATTGCAACTGCAT TGATGGCTCTACAGGAGATGAACCTTTCTGGATTACTTCCAAGACCAGCTAAGATTTGGATTTTATGCTTTTAAACGATGTGTGGCACCACAAACCATTG AAATCAAAGGTTTTAATTTACAAGTATCAACTAAGCAACTCTGGCATGTGTGATAAACAAACAAACCACGTTTGTAAAGTCAATATTCAATAAACTGTGA AATACTCTAAATTGGACAGATTTGCAATGCATTTTACTTTTCTACTGAATTAACAAAGGAGAATCCTAACCAGTGCCCTTATCAATAAAGGCGATATTTT ATTGAGA BLAST |
Tissue | flowers |
Gene name | LI_gene_36217; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_121737
Blastp | MADS-box transcription factor 27 from Oryza sativa with 65.13% of identity |
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Blastx | MADS-box transcription factor 27 from Oryza sativa with 72.08% of identity |
Eggnog | Transcription factor(COG5068) |
Kegg | Link to kegg annotations (4329771) |
CantataDB | Link to cantataDB annotations (CNT0001842) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019415009.1) |
Pfam | SRF-type transcription factor (DNA-binding and dimerisation domain) (PF00319.17) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |