| Id Trinity | FTRINITY_DN53724_c1_g4_i8 |
|---|---|
| Name Transcript | Ll_transcript_123864 |
| Sequence | ATTCATCATTACCAATTTTTTATATTCCTATTTTACCCCTCAACTTCCACTCTTCTTCATTTCAAAAAACCTAACTCAAAACTCAAAACTCAAAACTCAA AGCTCAAAAATCTCTCTCTGTCAATGGCGGTTTCCGAAGAAGAGTGTTCTTCCACTAAGCGCGGTGGTGGTGGTGGCGCTGCTGCTCGCTCTTTCTCTTC TTCTTCATCTGCCAGACGCTATTACCTTTCCAAGTGCGTTCTCAGAGGAAGCGTTGTTCTTCAACTCCTTTACGGTCATATTCGTTCACCTACCTCAAAC GACGTCGTTTTTGCTAAGGAGACATCTATAGAATTGGCAGTGATTGGTGAGGATGGAGATGTACATTCGGTTTGTGATCAGCCTGTTTTTGGCACCATTA AGGATCTTGCCATATTGCCCTGGAATGACAAATTTTGTGCCCGTGACCCACAGATGTGGGGTAAAGACCTTTTGGTTGCTCTATCTGATTCAGGGAAACT TTCGTTGCTCACGTTTTGCAATGAAATGCACAGGTTTTTTCCCATAACACATGTTGAACTATCTAATCCTGGAAACCCAAGAGATCTTCCTGGAAGGATG TTAGCAATTGATTCCAGTGGTTGTTTTATTGCTGCCAGTGCATATGAAGATCGGCTGGTTCTCTTTTCGATGTCAATGACTGGCAATGATATAATTGATG AGAGAATAACATATCCTTCTGAAGGGGAAGGCACTGCAGGTACTTCCAGAAGCATCCAGAGAACCAGTATACGTGGTACTATTTGGAGCATGTGCTTTAT TTCACAAAATTCCAGACAACCAAGCAAGGAACATAATCCTTTACTAGCTGTTATTCTAAATAGGAAGGGATCGCTTCTAAATGAATTGCTGTTATTGGAA TGGAATATTAAAGCACGTACAATCTTTGTTATTTCCCTGTATGTTGAAGCTGGGCCCCTAGCACATGACATTGTTGAAGTTCCTAATTCTTGTGGACTTG CATTTCTATTCAGGGCTGGTGATGCTCTCTTAATGGATTTTAGAGATCCTCACAATCCGTGTTGTGTCTATAGGACTAGCTTAAACTTTTTACCTAATGT CGTGGAAGAGCAGACTTATGTTGAAGACTCTTGTAAATTACACGATATTGATGATGAACGCTTCAATGTTGCTGCCTGTGCCTTGTTGGAGCTGAGTGAT TATGATCCTATGTGCATAGACAGTGACAATGGCAGTACAAGTTCAAGTTATAAGTACGTATGCTCATGGTGTTGGGAACCTGAAAATGGAAAAGATCCTA GGATGATCTTCTGTATAGATAGTGGAGAATTTTTTATGATTGAAATTCATTTTGATCCTGATGACCTTAATGTGAATCTCTCCGAGTGTCTCTACAAAGG TCTACCCTGTAAAGCACTTTTATGGGTTGAAGGCGGATATCTGGCTGCTCTTGTAGAAATGGGAGATGGCATGCTCCTGAAATTGGTAGATGGAAGGCTT TGTCATTCAAACCCTATTCAAAACATTGCACCAATCTTGGATATGACAGTTGTGGATTATCATGATGAGAGGCATGATCAAATGTTTGCTTGCTGTGGCG TGGCACCTGAGGGTTCATTAAGGATTATTCGGAGTGGTATTAGTGTAGAAAAGCTACTTAGGACTGCTCCTATATATCAAGGTGTAACTGGTACTTGGAC AGTTCGAATGAAAGTTGCTGATTCATATCATTCTTTCCTAGTTCTGTCGTTTGTTGAGGAGACCAGGATATTGTCAGTTGGCTTAAGTTTTACTGACGTG ACTGATTCTGTTGGTTTCCATCCTAATGTATGTACTTTGGCATGTGGCCTTGTGAGTGATGGTTTGCTTGTTCAGATCCACCAATCCACTGTTAGGCTTT GTTTGCCTACGAAGGCTGCTCACCCTGAAGGTATCCCTTTGTCCTCTCCTATTTGCACATCTTGGTCCCCAGACAATGTGAATATCAGTTTAGGGGTGGT TGGGCATAACTTTGTTGTTGTATCAACATCTAACCCATCATTTTTGTTTATCCTTGGGGTTAGATTGCTATCAGCTTCTCATTATGAAATTTATGAAATG CAGCATTTGGAATTGCAGAATGAATTATCATGCATTTCCATCCCTAGACAAAAAAATGTGCAAAAACAAACACATTCACCCATTCCAGCAAATAATAGCT GCATCTCCTCCTTTTTGAGTGGAGTGGACAACAATAAGACATTTATTATTGGCACACATAAGCCTTCTGTGGAAATTTGGTCTTTTGCATCTGACAGAGT TACTGTAGTTGCTCGTGGGACAATTTCATTAACAAATACTATGGGAACTGCTATAACTGGGTGTGTACCCCAAGATGTGCGTCTTGTATTTGTTGACAAG TATTATGTTCTAGCTGGATTGAGGAATGGAATGCTCCTTCGCTTTGAGTGGCCGGCAGAACCATCTCCTTCATCACCACTAAATGTGGTGGATACTGCTT CATCTTCTATAAACTTGGTAAATTCTGTGACTAATGTTTTTGACAAGAGGAGTGACCTTCCTTCCACTCTTCAATTGATTGCCATTCGTCGCATCGGCAT TACTCCAGTTTTCTTGGTGCCCCTGGGTGACACACTTGATGCTGATATAATTGCTCTGAGTGATAGACCTTGGTTGTTGCATACTGCAAGACACAGCCTT TCCTATACTTCTATCTCATTTCAGCCATCCACACATGTGACTCCTGTTAGCTCTGTTGATTGTCCAAAAGGAATATTATTTGTTGCAGAGAACAGTTTGC ATCTGGTGGAGATGGTGCAGAGCAAGAGACTTAATGTTCAGAAGTTTCATTTAGAGGGCACTCCACGGAAGGTCCTGTATCACAATGAAAGCCGGATGTT GCTTGTGATGAGGACAGAACTCAATTGTGGTACATGTTTGTCTGACATATGTTGTGTGGATCCCTTAAGTGGGTCAGTACTGTCATCTTTTAGACTTGAA CTTGGAGAAACAGGGAAATCCATGGAATTAATAAGAGTTGGAAGTGAGCAGGTGCTTGTAGTTGGAACTAGTCTGTCTTCTGGTCCAGCCATAATGCCCA ATGGTGAAGCTGAGAGTGCCAAGGGTCGTCTTCTTGTTCTCTGCCTTGATCATGTGCAAAATTCAGATAGTGGTTCAATGACATTCTGTTCAAAAGCTGG GTCATCATCTCAAAGGACTTCACCATTCCATGAAATTGTTGCATATGCTCCTGAGCAGCTTTCAAGCAGCAGTCTTGGCAGCAGCCCTGATGACAATAGT TCTGATGGCATCAAACTTGATGAAAATGAAGTATGGCAGTTTCGATTGGTTTATGCAACTACATGGCAGGGAATGGTACTTGCAATCTGTCCTTATACTG ATCATTACTTCTTGGCATCTGCTGGCAATGCCTTCTATTTATGTGGTTTCCCAAGTGACCATCCCCTAAGAGTTAGAAGGTATGCTGTGGGAAGGACACG CTTCATGGTAACATCTTTGACTACAGATTCTACTAGAATTGCAGTTGGTGATTGCCGTGATGGTATCCTTTTCTATTATTACCATGAGGAAGCAAGAAAG TTTGAGCAACTTTACTGTGACCCGTCACAGAGGTTAGTTGCTGATTGCATTCTTATGGATACTGAAACAGCAGTTGTTTCAGATCGCAAAGGAAGTATTG CTGTTTTATGTACAGAATATTTGGAAGACAGTGCAAGTCATGAAAGCAACTTGATACTAAGCTGTGGTTATTTCATGGCTGAGGTAGCCATGAGCATCCA AAAGGGCTCATATTCATACAGATTTCCAGCTGATGATGTTTTGCAAGGTGGCAATACTCCCAAGACAAATGTTGACTCAATGATAAATACTGAAAATACT ATTATTGCTAGTACTCTGTTAGGAAGCATAATCATCTTCACCCCTTTATCAAGGGAAGAATATGAGCTCTTAGAGGCGGTGCAAGCAAGACTTGTTGCCC ATCATCTGACAGCACCTGTTCTTGGAAATGATCATAATGAGTTTCGTAGCCGTGAAAATCCAGTTGGAGTGCCCAAGATACTCGATGGTGACATGTTGAC CCAGTTTTTGGAGCTAACAAATATCCAGCAACAGATGATTTTGTCTTCTTCAGAGCCACCGAAAACGGTAAAACCAACCTCAAAACCATTCCTACCTCCT CATATTTCGGTCAGCCAGGTAGTTCAACTTCTTGAAAGAGTTCATTATGCACTGAACTAGATACACATTTTGTTCCTCAATCCCCTTTTTT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_36265; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_123864
| Blastp | Pre-mRNA-splicing factor prp12 from Schizosaccharomyces with 21.44% of identity |
|---|---|
| Blastx | DNA damage-binding protein 1 from Gallus with 22.42% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (SPAPJ698.03c) |
| CantataDB | Link to cantataDB annotations (CNT0000034) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019444144.1) |
| Pfam | Mono-functional DNA-alkylating methyl methanesulfonate N-term (PF10433.8) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |