| Id Trinity | FTRINITY_DN53725_c0_g1_i14 |
|---|---|
| Name Transcript | Ll_transcript_122050 |
| Sequence | ATTCAGTAGTGTCTAAGGCCTTTTCTTTGCTACTTAATTTGGTGAACCTAGTTAGCCAGAATGATATATAGCACTGGACAAATTAAGAATCATTTTTGGG TGCTAGGATGAGGTACAAAACCACCTTTGAGAAAGTGAGAAGCTATATATGTCAAATTATAAGTTTTTGTTTCCTTTTTTTCATTTATCTGATTAAACAT ATTTTTGTGGCTATACATACAGTACAAAGTTAAACATAAGGTTAACCTTTTTCCAGGGTTTCCACTTTTATTTCATTTTGTGGCACTATTGTTTTATCCG TTTTGGTACCCTAGGCAAAGAGGGCATTTAAGAAACCATTCTCATCACTTAACCAATACTGGAAAGAGAGATCCAGAAAGAGTGTAAGGGTGTGTTGTCT ATATTATTTTAAAGAGAGAGAGATAAAAAAATATGGGAAGAGGGAGAGTTGAACTGAAGAGGATAGAGAACAAAATCAACAGGCAAGTCACATTTGCCAA GAGAAGAAATGGGTTACTCAAGAAGGCTTATGAGCTCTCAGTCCTCTGTGATGCTGAGGTTGCCCTCATCGTCTTCTCCAACCGTGGCAAGCTCTATGAG TTTAGCAGCACCTCCTGGGATGGGATGTTTGATGTGCAATTCTGCTTTACTTCACGATGTAATTTAAGGATGATGGCTACCAGAGAGAGAAAAGGGAGAA GCGTTGTCCTTTGGCTTATAATAATAAAGCTGCAAATGAACACCGATCCTTAAAACCGTTGTGGAATACCTGGTTTGATCTGAAACAAACAAAACATTGT TCTCACCTTTTGCAGACACAAATATATTCGTCTTTCAGTAGTGCTTAATAATTTATAATAATACTAATTAGAACAAATAGCAAGTCATCAAATAAAATCT CCTACATGTCACTTAAAATCGGTTCTTGTTTATTTTCTTTTAATAGAAATCTCTCTAAAAAGGAAAACTTTGGTGCTCATTTTAAGGTTTTGTTTGTTAT TAGAAACTTTCTATTTCTTTGGGGTATTGTATTAGAAAGTCTTTTTAATTTTTCATTATGTGACAAAATGTATTGGACTTGAGGATTTATAACTTCGGTT AATGGCCTCATGTAGCCATTTTCACTCGGCTTGTGAATAAATTTGTTCAGTGCTTTCAGTACACTTTATATTATCATAGTACAGTCATAACTATTAGGTC AATAAAAGTTACTAGCATCTTAAGATTGACCATTGGATCATCAGGGTCTGCAAAAATGTAAACTAAGAAAGGTTAGAAGATGATACTAGAGATGGCTACC TAGAATTTACAGAGAAAAAATAAAGGTTAAGCTAGTATTTGATATGTCTGATCAATTACTATCTGCTTGACTGTATACGTTGAGAAATTTCAAATTATAA ACTTGTTGCAAAGAGGAGAAAGAGATAGACACAAAGATTATCCTCAGGATTTCATAAATGTGTGCAAAATGACTGACACAGCTTATACAAAATGTAATGC TATAATCAAGTGATACTACATGATGTAATGATATTTAATTAATAAAAACTTACCAAATCACCAAATGCTACATCAAGTGTAAGGCTATATAATTTGAAGA AAAAACTATACATTGAGTTTATTTTTGAAGGGAAATAGTAACAAAAAGATATTGACCCTTCAATAGAGTACATAGTGATCTTCAATTCTATTTTTGCAAA TAAATGATCCCATATATTTTGATTAGGTTTTAATTTGCTTAATATGTCACAGTATGATGAAAACACTGGATAAGTACCAGAAGTACAGTTACAGTGCATT GGAGACTAGTCCATCAATCACTGACACTCAGACGAAATATCAAGAATATGTGAGACTAAAAGCGAAGGTAGAAGTGCTCCAACGCTCACAGAGAAACCTA CTTGGCGAAGATCTTGCCCAAATGAACACAACTGATCTAGCGCAGCTTGAGAATCAACTGGAGTCAGCACTGAGAAATATTAGGTCAACGAAGGTGATCG ACATTGGTTGACTCTATTTCAAAATCTATTTTGTAAATTAGTATATAATGTTTCTCATGATTTTAAATTGAGATTGCTGGTGTGGTTGAGGAATTTACAA TTGTCTGTATTGTGTTCAAGATGATGCATTACAGATGTTGTAATATAAAAACATTAATTATCAAAAAAATGAATATATTTTTGAATAAGATGCACTAAGT TAGGGTGAAATCATTTTAATGAGGGATCACATTATAATTACGGTATGATATAGTTGCCACAATAATTAGCATTGATGATATTATAACTACGTCAAGTAAT GTGATTCATAATTTGAAATCATACTCAAGACCTACATCTTTACTATCAAATCAGCTTATGACTTACTTATCTTGGATATATTTAACTTCTACTTTTACAC TTTTCAGACTCAATTCATGCTTGACCAGCTTGATGATCTTTACAACCGGGAAACAGTGCTTGTTGAAACTAATAATGCGTTAAGGAGTAAGTTGGAAGAA ACTAATAGCTCACAAGTTCCTGTGCCACTATCATTGGAAGCAGAAGTGCCTAACATCCATTATACCCGTTTTCCTCCTCATTCAGAAGGCTTTTCCCACC CTTTAGGAGTTAACCCCAACTTGCAAATTGGATACAGCCCAACGGGTACTGATGATGAAGGAAACGTTGGTGCTTCATCCTTAAATATGCATGGATTCGT ATCTGGGTGGATGCTTTGATGACATTGAATGAATGTCCAATCAACACAACAGATAGTAATGATGTTTGTTGAATAAATCCTTGGTTTATTTTGTAATGCA CATTATTTATCGGACCAGGATCATCTGTCCCAAATGAATAGCAATATGACACATCAATTAAAAAAATTAAACATTCATATTTTTTTTTCTATATTCTGAT TGACTTGGTACATAGTTGGGGACATATTTGTGGACAGAAGTTCCCACCCTTATTTATCAATGTTTAAATGAATAAAGTTGTTAGAAGTTTGTCATCATAA AAATATTTGAACCTACAATGTCGTACATTTATATGGAAAGTGACACATATTAGCATTTATGCCTGAGAAATTATAGACTTGGGATGAATTCAGCTCAAAG TGAGAGCTCTAATGACAAGGGACTTGGTTTCCATTGATCAATGTTTCAAGTTTTTGTTTTATTTTTTATCAAAATATTCACTTGGCTGAATTGATACGAG AGGAATCTCCATGAACTGCTTAGGAAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_36271; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_122050
| Blastp | MADS-box protein CMB1 from Dianthus with 98.36% of identity |
|---|---|
| Blastx | MADS-box protein CMB1 from Dianthus with 98.36% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | Link to cantataDB annotations (CNT0002508) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019438979.1) |
| Pfam | SRF-type transcription factor (DNA-binding and dimerisation domain) (PF00319.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |