| Id Trinity | FTRINITY_DN53725_c0_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_122036 |
| Sequence | ATTCAGTAGTGTCTAAGGCCTTTTCTTTGCTACTTAATTTGGTGAACCTAGTTAGCCAGAATGATATATAGCACTGGACAAATTAAGAATCATTTTTGGG TGCTAGGATGAGGTACAAAACCACCTTTGAGAAAGTGAGAAGCTATATATGTCAAATTATAAGTTTTTGTTTCCTTTTTTTCATTTATCTGATTAAACAT ATTTTTGTGGCTATACATACAGTACAAAGTTAAACATAAGGTTAACCTTTTTCCAGGGTTTCCACTTTTATTTCATTTTGTGGCACTATTGTTTTATCCG TTTTGGTACCCTAGGCAAAGAGGGCATTTAAGAAACCATTCTCATCACTTAACCAATACTGGAAAGAGAGATCCAGAAAGAGTGTAAGGGTGTGTTGTCT ATATTATTTTAAAGAGAGAGAGATAAAAAAATATGGGAAGAGGGAGAGTTGAACTGAAGAGGATAGAGAACAAAATCAACAGGCAAGTCACATTTGCCAA GAGAAGAAATGGGTTACTCAAGAAGGCTTATGAGCTCTCAGTCCTCTGTGATGCTGAGGTTGCCCTCATCGTCTTCTCCAACCGTGGCAAGCTCTATGAG TTTAGCAGCACCTCCTGTATGATGAAAACACTGGATAAGTACCAGAAGTACAGTTACAGTGCATTGGAGACTAGTCCATCAATCACTGACACTCAGACGA AATATCAAGAATATGTGAGACTAAAAGCGAAGGTAGAAGTGCTCCAACGCTCACAGAGAAACCTACTTGGCGAAGATCTTGCCCAAATGAACACAACTGA TCTAGCGCAGCTTGAGAATCAACTGGAGTCAGCACTGAGAAATATTAGGTCAACGAAGGTGATCGACATTGGTTGACTCTATTTCAAAATCTATTTTGTA AATTAGTATATAATGTTTCTCATGATTTTAAATTGAGATTGCTGGTGTGGTTGAGGAATTTACAATTGTCTGTATTGTGTTCAAGATGATGCATTACAGA TGTTGTAATATAAAAACATTAATTATCAAAAAAATGAATATATTTTTGAATAAGATGCACTAAGTTAGGGTGAAATCATTTTAATGAGGGATCACATTAT AATTACGGTATGATATAGTTGCCACAATAATTAGCATTGATGATATTATAACTACGTCAAGTAATGTGATTCATAATTTGAAATCATACTCAAGACCTAC ATCTTTACTATCAAATCAGCTTATGACTTACTTATCTTGGATATATTTAACTTCTACTTTTACACTTTTCAGACTCAATTCATGCTTGACCAGCTTGATG ATCTTTACAACCGGGAAACAGTGCTTGTTGAAACTAATAATGCGTTAAGGAGTAAGTTGGAAGAAACTAATAGCTCACAAGTTCCTGTGCCACTATCATT GGAAGCAGAAGTGCCTAACATCCATTATACCCGTTTTCCTCCTCATTCAGAAGGCTTTTCCCACCCTTTAGGAGTTAACCCCAACTTGCAAATTGGATAC AGCCCAACGGGTACTGATGATGAAGGAAACGTTGGTGCTTCATCCTTAAATATGCATGGATTCGTATCTGGGTGGATGCTTTGATGACATTGAATGAATG TCCAATCAACACAACAGATAGTAATGATGTTTGTTGAATAAATCCTTGGTTTATTTTGTAATGCACATTATTTATCGGACCAGGATCATCTGTCCCAAAT GAATAGCAATATGACACATCAATTAAAAAAATTAAACATTCATATTTTTTTTTCTATATTCTGATTGACTTGGTACATAGTTGGGGACATATTTGTGGAC AGAAGTTCCCACCCTTATTTATCAATGTTTAAATGAATAAAGTTGTTAGAAGTTTGTCATCATAAAAATATTTGAACCTACAATGTCGTACATTTATATG GAAAGTGACACATATTAGCATTTATGCCTGAGAAATTATAGACTTGGGATGAATTCAGCTCAAAGTGAGAGCTCTAATGACAAGGGACTTGGTTTCCATT GATCAATGTTTCAAGTTTTTGTTTTATTTTTTATCAAAATATTCACTTGGCTGAATTGATACGAGAGGAATCTCCATGAACTGCTTAGGAAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_36271; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_122036
| Blastp | MADS-box protein EJ2 from Lycopersicon with 76.92% of identity |
|---|---|
| Blastx | MADS-box protein EJ2 from Lycopersicon with 76.92% of identity |
| Eggnog | Transcription factor(COG5068) |
| Kegg | Link to kegg annotations (543884) |
| CantataDB | Link to cantataDB annotations (CNT0002508) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019438979.1) |
| Pfam | SRF-type transcription factor (DNA-binding and dimerisation domain) (PF00319.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |