| Id Trinity | FTRINITY_DN53726_c2_g1_i8 |
|---|---|
| Name Transcript | Ll_transcript_122017 |
| Sequence | ATTAGTAAGAAAATTTTGCACTTGGCCGTGACAGAAATAGTTTAAGTTTGTTTCGGCAAGTGCAATGTTCTTTTAAATGACAAAATGGAATTTAAATTAT GAACTATGTTATTTGTGTTCCATCAGCCTCAACCATCAATCCCTATAATCTCGTAGTTGCTTTAGGTTTTGGAACTGCGAGGACAGAAGCTTGAGGTCAA GATTTTGAGCATTGCCGAACACGAGGAGGCTGATGAGTTTATAATTGGGATTCCGAAATCTTCTGATGGGAAGGAAACACCGCAATCAAACAAAGTCCGT AGTGTTGCAGGCAGGCTCGCTGTTCAAGCTGCTGAGAGGGGTTGGAGAGTGTACCTACAGGATGAACATGGGACCACAACAGAAGCGTTAGATCGGATGA TCAGATTGGGCCTAAGTAAATCCTCCCGGCAAGGGAAAATTGACGCGTATGCTGCGGTGATGGTACTGGAGAGATATTTCTCAACATCAGGTCGTGATAC TGAACTTGTTTTGCCAAAAAGCTCGGAACTACAAGGGAAACTCCGAAGGGGTCCTCCGAAGGATTTAGATTTCTACTCAGATGAAGACTAATCACAGAGA AAATTCCTTTTGTCGTTAGCTTCCGCGGTGAATTCGAATAGTTGTGCCTGGTAATAACTGATTATTTAAGATGCAGCTTATTTGTACTCCTTCATCATTC TTGTTTACAAATAGTATGCAAAAAAAAAGTACAAGAGAAGCATATTCCAATAGTTAATGATCAAGGATTTTGTTTTTGCATCTCCCAAGGGAGGGTAGCA TGGAGAGAATGGCTATTCACGGCATTGAAGTTATTGTAAAGCAATATTTACAATAACATGGATACAGTGATTGTGTATAAATCTTTATATTGACAGTGCA TAGATATTATACTCTATCTATTTATTTATAATAGTACATATTATTCGGGTAGGTTGTTGTAAATCAACAGCATCTGAACTTGGTATGTTAAGAAAATGAG ACTGCATATGGATAATGCTTGTGTAACAAAACTAGTGCCAAAAATGTGAGAGGATGCTGTGGAGGACACTATTTCATACCCTATCAGCTATCTAATAGTT AGTCTGTAAAGGTTTTTGTACTTTTTGTGGCTAATAATTTTGTGGCAGTAGCATTAGTGATGGTTCATTGTGCATATTGCATTTCCTAATTGCCAAATTT ACATATTTCCTATGGTTGTTGGTTAACAAATTCAAGTACAAATGCAGGATGATATAGACAGTACATTATTCACCATTTATATATGTTAGTTTTATTACTT TTTTGAAGAGTCAATGAT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_36279; |
| Additional information | - |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_122017
| Blastp | - |
|---|---|
| Blastx | Putative pre-16S rRNA nuclease from Shewanella with 34.04% of identity |
| Eggnog | Could be a nuclease that resolves Holliday junction intermediates in genetic recombination (By similarity)(COG0816) |
| Kegg | Link to kegg annotations (SO_3347) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019463335.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |