Id Trinity | FTRINITY_DN53729_c3_g1_i4 |
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Name Transcript | Ll_transcript_123186 |
Sequence | AAATAATTTCACTGTTGGGTTGACAACAACAACCTTAACTATTTTGTTAATAATAATATAATCTTAATCCTTTTATCATGTAAAATGTTAAAACACAGTT TGAACTGAATTGTTGGATCTGAATTGGTAAGATTGAAGAATCAGAAGAAAACATGGCAACGATGGGAAGAGCAAGTTCTGGATTGCAATACCCAGAACGG TTTTATGCTGCAGCTTCTTATGTGGGTTTTGATGGATCTACTTCTCCCACTAAATCTAAGTTCCCAAATTCTACTGCTCTTCTACTCTACACATTATATA AGCAGGCTACTATAGGACCTTGTAACATCCCAGAACCCAGCACATGGAAAATTGTCGATCATAGCAAATGGGCCAGTTGGAACCAACTTGGAAACATGTC TTCCACAGAAGCCATGCGTCTTTTTGTAAAAATATTAGAGGAAGAAGATCCTGGTTGGTATTCAAGAGCATCTAACTCTGTTGTAGAGCCTGTAATAGAT GTGCAAATTAATCATAATTCCAAAGTTGAACCAGTAATCGAGAATGGCAACTCTTATCCAGAGATAAAGACCATTTCGGCTGAAAATGGAAGTCAAGTTA CACAGGACAAAGATGTTGTTGTGGAAGGCTTTGGTTCAGTTGTAGTTTGTGATGAATGGATTGCACCTCCAGTATCCGGTCAACGTCCAAAAGCCCGATA TGAGCACGGAGCTGCAGTTGTGCAAGATAAATTGTATTTATATGGTGGAAACCACAATGGCCGTTACCTTAGTGATCTTCATGTTCTAGATTTGAGAAGT TTGGCTTGGTCAAAGATTGAGGCTAAGGCTGGAGCTGAGTCCCCATTAACTTTATCCCCTTGTGCAGGCCATTCTTTGGTTCCATGGGGGAATAAGCTTC TGTCTGTTGCTGGGCATACAAAGGATCCTTCCGAAGTTATCCAAGTGAAAGCTTTTGATTTGCAAACTTCAACTTGGTCAGATCTGAAGACTTATGGGAA ATCCCCGGTATCACGTGGAGGGCAATCTGTGAACCTTGTTGGATCAAGCTTAATAGTTTTTGGTGGACAAGATGCTAAGAGGACTCTCTTGAATGATCTG CATATTCTCGACTTGGAAACCCTAACATGGGATGAAATTGATGCTGTTGGGGTACCTCCTTCTCCAAGATCTGATCATACTGCTGCTGTACATGTGGAGC GATACTTACTTATCTTTGGTGGAGGTTCACATGCAACTTGCTTCAATGACTTACATGTTCTCGATTTGCAAACTATGGAATGGTCTAGACCCATACAACA GGGTGAAATACCTACGCCACGTGCTGGACATGCCGGTGTAACTGTAGGGGAGAACTGGTTCATTGTTGGCGGTGGTGACAATAAGAGTGGTATGATTTTT GGCACCTTCTTACTTAGATTCAAATTTTTTGTTGACATTTAATTACAAGTTTTTACTATGCAAGATGTTTCTTGATATTTTGAACAAATGGTATCTGAAA TTCTGGCATACATGTAAATACTGTGGGTCAAAAAAAAATTCCGGTCTAGTGCACAAGGCTTCCACAAGCGAAGAGGTTGTTTATGGAATTTGGATCTGTG ATCTATTGGCCACTAAGCAACAACCTTACTGTTGCGCTGTGGCTCACCCTCACCGTGGACCAAACTAAACCAAAGAAATTATATTTGTGGTGAAAGATTG AGTTCTGTTTGGTTAAACAAAACTAAATTACCAAAACGGACGTTGGTTCAAGTGGTACATGCTTGATTCCCCTTAAGCAAGGTCTCGGGTTCGATCCTTG TGGATGGAAAA BLAST |
Tissue | flowers |
Gene name | LI_gene_36296; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_123186
Blastp | Acyl-CoA-binding domain-containing protein 4 from Arabidopsis with 72.79% of identity |
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Blastx | Acyl-CoA-binding domain-containing protein 4 from Arabidopsis with 72.79% of identity |
Eggnog | Kelch domain containing(ENOG410Y5WM) |
Kegg | Link to kegg annotations (AT3G05420) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019423018.1) |
Pfam | Acyl CoA binding protein (PF00887.18) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |