| Id Trinity | FTRINITY_DN53748_c0_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_123460 |
| Sequence | CTTGTCCTATCACTTCACTACACAACTTCATTCACATTCATTTTCTTCATAAAGCTGCTTTGATTCTGGAGCGTGTTGAAAGAGGTTGCTTCATACAGTT ACACAGGCTAGGATCTTCACCTCAACACCTTCTCTAGATTGAACATTGATCAAGAAGGTTGATGGCTAGCGGTGCTGAATCATTTGCTTTAAAAGTTGCT AATGTGATTGTTGGACAAGTTGGATATCAGATTGGTTACATAATCACTTATGAGAGGAACATTGACAACCTCAGTGTCAATGTTGTAAAGTTGGAGGAGG CCAAAGAAGCTATCCAACACTCTGTTGAAGAAGCCACAAGGAAAGGAGAAGATATTGAGAGAATGGTGAAGAACTGGTTGGAGAGAGTGGATGGAATTAT GACTGAGGCAACGACTTTTCAAAAGGCGGAAGGGCATGCAAAAGCAGAATGTTCATGTGGCCGTTTTCCTGATATATGGACAAGGCACAAGCTGAGTAAG AAAGCTAAAGAGATAGAAAAAGACATTCTTGAAGCCATAGATGATGGCAACTTCCAAAAATTTTCTTACCAGCCTCGTTTGCTCGTTGGAATCACTTCTT CAAATGCTAGAGGTTATGAGGCGCTGAATTCAAGAACAAATATCATGAATAAGATTGTGCAGACACTGATGGATGTTGAAGTGTGCAAGACTGGAGTGTG TGGAATGGGTGGTGTGGGTAAATCCACACTAGTCAAGGAGTTGGCATGGAAAGCAGTACAAGATTGTTCATTTCACACTGTGGTTTCGGTTGAACTAACT GAATCTCCTGATGTCAAATCAATTCAAGTTAAAATTGCTGAATGTTTGGGCATGAAAAAATTCGAGGTGGACACAATAAATGTCAGAGCAAGTCTGTTAC GCGAAAGGATACGTAAGGAGGAAAGTATTTTGATTATAATGGATAATATATGGGAGAAACTTGATTTGATAGAAGTTGGGGTGCCTTTTGGTGATGATCA CAAAGGATGCAAGTTATTTTTTACCTCAAGAAGTCTTCATGTTTTGACAGAAGAGATGGGCGTTGATGAACAATATTGTTATAAACTTGATGTCTTATCT AAAGACGAGAGTTGGGACTTATTTGAGAAGAAGGTTGGTGATGCCGTTAATGATTCCAAATTAAGGCCTATTGCTGTGAAAGTAGTTGAAGCTTGTGGCG GTTTGCCCGTTCTCATATTTCCTGTGGCGAATGCATTGAAAAACAAGCGTAAGCCTATTTGGGATGAAGCTTTAAAACAACTGACAAGATTCGACAACAA AGATTTGAATGCTACTGTGTACTCGGCAATAAACTTGAGTTATGATCATCTAGCAAATGATGAATTAAAATCATTCCTTTTGCTTCTTGGTTCGTTTGGA CAAACTGAGATATGGACAAGATATTTGTTAATATATTTCTGGAGCCTAGACATATATGAAGATGGTGATTGCTTGGCAAATGCAAGAAATAGGCTCTACA ACTTGGTGAGAAAGCTAAGGTCAGCTTGTTTGTTGCTTGAAGAAGAAAAAAAAGAATCAGTTAAAATGCACGACCTTGTCCATGAAGTGGCTAGCAAACT TGCATCCAAAGATCGAACTATATTTGCCGTGAAAATACACAGCGAACTGAAAGAATGGCCCAAAATGGATACGCTTAGACAGTGCTACCGCATGTTCTTG CCTGATTGTCGTATGCATGACCTTCCCGAGAGATTGGAATGTCCAGAGTTGGAGATACTTGTACTTGTAAGTCGAAATAACTTTCTAAAAGTACCTGATA ATTTTTTTGCAGGAACAAAAGAAATGAAGGTTCTGTATCTTGGAGGAATGGATTGCATCCCATCCATTCCTTCATCTCTCTCTCGATTGCCAAAGCTTCG AGCATTGTACCTTCGTGAATGCATGCTGGAGGACATAGCTCTAGTTGCAGAACTCAAGAATTTGGAGATTCTTGGCTTTGAAATTTCTGAGATTAGAAAG ATCCCAGCAGTTATAGGGAAGCTTACTCGACTCAGGTTGCTAGATTTAAGCAATGTCTCAGGACTGAGAGCAATTCCTGCAAAACTCATATCAGGCTTAC ATCACTTGGAAGAGCTCTATACGATGAACACCTTTATACAATGGGAGGGCAAGAAGAGCAGAAACAAAAGCCAAAGTCAAAGCCAAAGCAACAATGCATC TCTTGATGAGCTACGACATTTAGATCAACTTAAAGCATTGGAGATTACTATTCAAGATGCTTCAGTTCTGCCTAAAGATTTACTCATCTTTGGTCAGTTG GACAAATACAAAATTTACATCGGTAGTGGTTGGAAACGTTCATGGAATAGAGAAATCTCTAAAACACTGAAGCTTGATCAAGGCAACACTAAAAATATTC ACTTGGATGAAGGGGTCAAATTGTTGTTGAATAATGCTGAGGAGTTGTGCTTGACCAATTTGAATGGTGTCAGTAATGCCCTTTGCCAATTAAATGAAGA AGGATTCCCACAATTGATATATTTGGATATCGAAAACAGTAAGAGCCTTCAGTATATCATTGACACAAAACACCATTCATGTGAAGCCTTTCCCAAGCTT GAGTCTTTGGTTCTCCGCAATCTACCTAAGATGCAGAAAATATGTGATGGCCCACTTTCGGTACAGTCTTTCACCAAATTGAAAGTTATCAAAGTTAAAG GTTGCGATAAGTTGCAAAATGTTTTCTCCTATTCAACTGTTACAAGCCTTTCCAAACTTGTTGAATTAGAAATTTCTCAATGCAAAGTTATGTCTGAGAT CATTGCTGACGCCGATATTGATATTGATGAGATTGAGTTCCCTCATTTGCATTCACTTACCATAGATTGTGTACCTAGTCTTGTTAGTTTCTATTCCAAG CCTGTGACTAATGATATAGAATTGACAAGCATTGTTGAGTACGAGGATGACTCGACCATTCCAACACCACTATTTGATGAAAAGATTTCATTTCCCAACT TGGAGAGCTTGAAGATTTCTTCGATCAACTTGGTGACGATATGGGGTGATCGACTATCGGAACGTTCAACCGTAAAGAAGTTGCAGAGTTTGGCCATAAA TGGTTGTGCAAACTTAAAGTCATTGTTCACATCATCTGTGGCTAGAGGGCTGGTGAATCTTCAACATCTCAGCATTAGTGGATGTGGAATGTTGGATGAG ATATTTTCTGCAGAGACACTTCCTTCTACTAAAATATCAGTTTCAAATGATGAGGCTGCATTCCCTAGCTTGGAAACATTGACAGTCTCTAATATGGATA GCTTGAAGTCAATATGGAATGATCAATGGGCTTCAAATTCCTTTCCCAAGTTGATTACATTGGAAATATCATTCTGCAGTACATTAATAAATGTATTCCC TCCTTATATGCTACCAACTCAATTGACAACTTTGACTTTGCAACATTTGCCAATGTTGGAGAACATATGGAGTACGGATCCTCATCGAAGCTCCGGGTTT CAAAACCTGTGCAAAGTGGAAGTAACTGAATGCCAAAGCCTAAATCATGTCTTTCCACTCTGTATGGCTGTGGAGTTTACGAAACTCGAAGTGCTTGATA TATCTAGTTGTGGTATAGAGCACATTGTTGGAAGTGATGAATTACGAGAGAAAGTTCCAAAACTTGATTTACCACAATTGAGATCCTTGAGACTTTGGCG TTTGAAAAATCTCAGAAGCTTTTGTTCCGAAATGCAGACCTTGGAATGTCCCAACTTAAAAGACATAGATGTGTATGATCATGGTATGTTGGAGATATTT GCACTGGACTCTCAAGACCCCCAAGATGCCTTAGTTGATCAACAACCTCTCTTCTCATTTGAAAAGGTTATTCAGAATTTGGAGGAATTATCTCTAAGCA GTGAGGATGTAGCATTGATTTGTAGTGATGAACAAAATGATGATGATTTCCACAGAGTAAAATCACTTCGCTTGCAATGCTTTAATGAGTCTGATGATTT CCCCTCTAATTTCCTTCAAAGATTTACCAATCTTGAGAAGCTTTTACTATTCGGCTGTTCCTTCCGAAGTATCCCTGACATTGATCTTGTAGAGGCAAAC ATTAAGCTGAAATGTCTAAGGATTAACTCATTATGGAATCTTGAGCACATATGTGAAGAGGAAACAAATATGGAAGAGATTCTTCAAGAACTTGAAAGAT TGGAAGTGTATCATTGCTCTAGTTTGAAGACTATTGCCCCATCATTTGTGAAATTTGTGAACTTAGATACTTTGTCACTGTATAATTGTGCTTCATTGGT AACTATCATGTCTTCCTCAACAGCTAGAAGTTTGCCGAAACTTAGAAGGTTATGGATATGTAATTGCAGCATGCTAGAGGAAGTCGTGGTCAATGACGAC GATGCGGGTGAGATTGCTTTCATGAAACTCGAGGTTTTGGAATTAGGAAGTTCGCCAAAGCTCGCGTCTTTCTGTAATGGAAATGTCGCGTTCAAATTTC CGTTGTTACAAAGTCTGATTTTGGTAGGATGCCCCATGATGGAGATTTTCTCTCAAGGAATCTCAAGAACACCAATGCTTAGACACGTATACGTAACGAA GCAAGGAAATGAATGGCGTTGGGAAGGCGATCTCAATATTACAGTATCAGAAGTTTTCAGACAATCATCAAAGCAAAACTCCTAAAATAATGTGTTTGGC ATAGCCAACACATAAAAGCTGAGAGCAGAACAAGGACAAGTGCATTTGCTTCTTCTCTTGGTCTTTAGCATTATCTGCAATTTCAGAATGAAATATTTTA ACATTTGAGTATGTCATCAAAATTTGAAGGATTAAGGAAGCTGTACTTTTATTCCCTCATCTTAGATATTTAGCTTTGTATCAATTTGGTTCTTTACTCT TATGCCATTGGTTTTTCTTTTCCTTTAAGCACATTGGTCTTTAAGTTTCTTCTCTATGATCATAAGTTGTGTTGCTATTTAGTTCTTTTCCTTTTAAATG TTATGTTCAATGTAATGAATTGAAAACTATCATGGGTTATGTTGTGGCTATGAAATAATCTGGTTATTGTACTAAAGTTTTATAGTGGTTTTTCTTGATG TTGTTGTAATGTTTGTTTTGGTTGTATCATGGGTAGTGTTTGTTATGTTTATATATGTTCTGATTTTGC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_36455; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_123460
| Blastp | Disease resistance protein At4g27190 from Arabidopsis with 25.83% of identity |
|---|---|
| Blastx | Disease resistance protein At4g27190 from Arabidopsis with 25.46% of identity |
| Eggnog | leucine Rich Repeat(COG4886) |
| Kegg | Link to kegg annotations (AT4G27190) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019425392.1) |
| Pfam | NB-ARC domain (PF00931.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |